2.36 10221 10221 U 0 unclassified 97.64 422103 144 R 1 root 97.60 421943 1 R1 131567 cellular organisms 97.59 421921 139 D 2 Bacteria 97.54 421674 99 D1 1783272 Terrabacteria group 57.47 248478 5 P 1239 Bacillota 57.47 248467 85 C 91061 Bacilli 57.44 248338 215 O 186826 Lactobacillales 56.01 242140 4320 F 33958 Lactobacillaceae 34.34 148469 18014 G 2767842 Lactiplantibacillus 29.97 129576 121457 S 1590 Lactiplantibacillus plantarum 1.78 7708 7693 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.00 15 15 S2 767468 Lactiplantibacillus plantarum subsp. plantarum P-8 0.02 93 93 S1 1284663 Lactiplantibacillus plantarum ZJ316 0.02 83 83 S1 1385856 Lactiplantibacillus plantarum 2025 0.02 73 73 S1 1327988 Lactiplantibacillus plantarum 16 0.02 71 71 S1 644042 Lactiplantibacillus plantarum JDM1 0.01 60 60 S1 220668 Lactiplantibacillus plantarum WCFS1 0.00 14 14 S1 1304889 Lactiplantibacillus plantarum CMPG5300 0.00 11 11 S1 889932 Lactiplantibacillus plantarum ST-III 0.00 6 6 S1 1300221 Lactiplantibacillus plantarum DOMLa 0.09 389 389 S 271881 Lactiplantibacillus argentoratensis 0.07 318 318 S 60520 Lactiplantibacillus paraplantarum 0.04 167 162 S 1589 Lactiplantibacillus pentosus 0.00 5 5 S1 1136177 Lactiplantibacillus pentosus KCA1 0.00 5 5 S 2993456 Lactiplantibacillus carotarum 13.81 59683 1288 G 2759736 Lacticaseibacillus 7.01 30318 21409 S 1597 Lacticaseibacillus paracasei 1.89 8165 8165 S1 113557 Lacticaseibacillus paracasei subsp. tolerans 0.14 617 613 S1 47714 Lacticaseibacillus paracasei subsp. paracasei 0.00 4 4 S2 537973 Lacticaseibacillus paracasei subsp. paracasei 8700:2 0.02 108 108 S1 321967 Lacticaseibacillus paracasei ATCC 334 0.00 19 19 S1 1446494 Lacticaseibacillus paracasei N1115 6.48 28015 27945 S 47715 Lacticaseibacillus rhamnosus 0.01 29 29 S1 568704 Lacticaseibacillus rhamnosus Lc 705 0.00 20 20 S1 1088720 Lacticaseibacillus rhamnosus ATCC 8530 0.00 8 8 S1 568703 Lacticaseibacillus rhamnosus GG 0.00 6 6 S1 1316933 Lacticaseibacillus rhamnosus LOCK900 0.00 5 5 S1 1380361 Lacticaseibacillus rhamnosus DSM 14870 0.00 2 2 S1 1318634 Lacticaseibacillus rhamnosus LOCK908 0.01 25 11 G1 2759744 unclassified Lacticaseibacillus 0.00 9 9 S 3068307 Lacticaseibacillus sp. NCIMB 15474 0.00 4 4 S 3068308 Lacticaseibacillus sp. NCIMB 15475 0.00 1 1 S 3068305 Lacticaseibacillus sp. NCIMB 15471 0.00 17 17 S 2100821 Lacticaseibacillus chiayiensis 0.00 12 10 S 1582 Lacticaseibacillus casei 0.00 2 2 S1 1423732 Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393 0.00 5 5 S 57037 Lacticaseibacillus zeae 0.00 2 2 S 88233 Lacticaseibacillus manihotivorans 0.00 1 1 S 171523 Lacticaseibacillus pantheris 4.41 19087 126 G 1578 Lactobacillus 4.14 17884 17818 S 1579 Lactobacillus acidophilus 0.01 38 38 S1 1314884 Lactobacillus acidophilus La-14 0.01 28 28 S1 272621 Lactobacillus acidophilus NCFM 0.18 775 757 S 1587 Lactobacillus helveticus 0.00 7 7 S1 880633 Lactobacillus helveticus R0052 0.00 6 6 S1 767462 Lactobacillus helveticus H10 0.00 2 2 S1 326425 Lactobacillus helveticus CNRZ32 0.00 2 2 S1 767456 Lactobacillus helveticus H9 0.00 1 1 S1 405566 Lactobacillus helveticus DPC 4571 0.05 209 157 S 1584 Lactobacillus delbrueckii 0.01 35 26 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.00 9 9 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 0.00 5 5 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 5 5 S1 249265 Lactobacillus delbrueckii subsp. indicus 0.00 3 2 S1 83684 Lactobacillus delbrueckii subsp. delbrueckii 0.00 1 1 S2 1423823 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 0.00 2 2 S1 1050107 Lactobacillus delbrueckii subsp. sunkii 0.00 2 0 S1 1537158 Lactobacillus delbrueckii subsp. jakobsenii 0.00 2 2 S2 1217420 Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 0.02 72 0 G1 2620435 unclassified Lactobacillus 0.02 71 71 S 2099789 Lactobacillus sp. CBA3606 0.00 1 1 S 2695882 Lactobacillus sp. 3B(2020) 0.00 14 14 S 47770 Lactobacillus crispatus 0.00 4 3 S 1604 Lactobacillus amylovorus 0.00 1 1 S1 695562 Lactobacillus amylovorus GRL1118 0.00 3 3 S 267818 Lactobacillus kefiranofaciens 2.00 8641 101 G 2767893 Lentilactobacillus 1.97 8531 8298 S 1581 Lentilactobacillus buchneri 0.05 203 0 S1 2737512 Lentilactobacillus buchneri subsp. silagei 0.05 203 203 S2 1071400 Lentilactobacillus buchneri subsp. silagei CD034 0.01 30 30 S1 511437 Lentilactobacillus buchneri NRRL B-30929 0.00 8 8 S 1588 Lentilactobacillus hilgardii 0.00 1 1 S 152331 Lentilactobacillus parabuchneri 0.35 1508 44 G 2767885 Latilactobacillus 0.33 1445 1442 S 1599 Latilactobacillus sakei 0.00 3 0 S1 214326 Latilactobacillus sakei subsp. sakei 0.00 3 3 S2 314315 Latilactobacillus sakei subsp. sakei 23K 0.00 19 19 S 28038 Latilactobacillus curvatus 0.02 82 0 G 2767889 Loigolactobacillus 0.02 76 76 S 375175 Loigolactobacillus backii 0.00 3 3 S 1607 Loigolactobacillus bifermentans 0.00 3 0 S 1610 Loigolactobacillus coryniformis 0.00 3 0 S1 115542 Loigolactobacillus coryniformis subsp. torquens 0.00 3 3 S2 1423822 Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 0.02 77 1 G 2767887 Ligilactobacillus 0.02 74 73 S 1624 Ligilactobacillus salivarius 0.00 1 1 S1 362948 Ligilactobacillus salivarius UCC118 0.00 1 1 S 1622 Ligilactobacillus murinus 0.00 1 0 G1 2767920 unclassified Ligilactobacillus 0.00 1 1 S 3050131 Ligilactobacillus sp. BD7642 0.02 71 1 G 2767886 Levilactobacillus 0.01 53 52 S 1580 Levilactobacillus brevis 0.00 1 1 S1 1334191 Levilactobacillus brevis BSO 464 0.00 17 17 S 267363 Levilactobacillus zymae 0.01 61 0 G 2767882 Furfurilactobacillus 0.01 61 61 S 231049 Furfurilactobacillus rossiae 0.01 54 0 G 1243 Leuconostoc 0.01 43 1 S 1252 Leuconostoc carnosum 0.01 42 42 S1 1229758 Leuconostoc carnosum JB16 0.00 6 6 S 1245 Leuconostoc mesenteroides 0.00 4 4 S 1246 Leuconostoc lactis 0.00 1 1 S 136609 Leuconostoc kimchii 0.01 47 0 G 1253 Pediococcus 0.01 44 44 S 1255 Pediococcus pentosaceus 0.00 2 2 S 51663 Pediococcus damnosus 0.00 1 0 G1 1670797 Pediococcus acidilactici group 0.00 1 1 S 1254 Pediococcus acidilactici 0.01 22 0 G 2742598 Limosilactobacillus 0.00 19 16 S 1613 Limosilactobacillus fermentum 0.00 2 2 S1 334390 Limosilactobacillus fermentum IFO 3956 0.00 1 1 S1 767453 Limosilactobacillus fermentum F-6 0.00 1 1 S 1632 Limosilactobacillus oris 0.00 1 1 S 97478 Limosilactobacillus mucosae 0.00 1 1 S 227942 Limosilactobacillus gastricus 0.00 7 0 G 46255 Weissella 0.00 2 2 S 1249 Weissella paramesenteroides 0.00 2 2 S 137591 Weissella cibaria 0.00 2 2 S 1631871 Weissella jogaejeotgali 0.00 1 1 S 759620 Weissella ceti 0.00 5 1 G 2767888 Liquorilactobacillus 0.00 2 2 S 468911 Liquorilactobacillus hordei 0.00 1 1 S 1618 Liquorilactobacillus mali 0.00 1 1 S 82688 Liquorilactobacillus nagelii 0.00 3 0 G 2767891 Schleiferilactobacillus 0.00 3 3 S 304207 Schleiferilactobacillus harbinensis 0.00 2 1 G 2767890 Paucilactobacillus 0.00 1 1 S 1296540 Paucilactobacillus nenjiangensis 0.00 1 0 G 2767879 Companilactobacillus 0.00 1 1 S 1007676 Companilactobacillus ginsenosidimutans 1.38 5951 50 F 1300 Streptococcaceae 0.95 4102 556 G 1357 Lactococcus 0.78 3379 2765 S 1358 Lactococcus lactis 0.14 614 495 S1 1360 Lactococcus lactis subsp. lactis 0.02 69 69 S2 1046624 Lactococcus lactis subsp. lactis IO-1 0.01 35 35 S2 44688 Lactococcus lactis subsp. lactis bv. diacetylactis 0.00 6 6 S2 684738 Lactococcus lactis subsp. lactis KF147 0.00 6 6 S2 1117941 Lactococcus lactis subsp. lactis NCDO 2118 0.00 2 2 S2 929102 Lactococcus lactis subsp. lactis CV56 0.00 1 1 S2 272623 Lactococcus lactis subsp. lactis Il1403 0.03 118 101 S 1359 Lactococcus cremoris 0.00 17 2 S1 2816960 Lactococcus cremoris subsp. cremoris 0.00 8 8 S2 1104322 Lactococcus cremoris subsp. cremoris A76 0.00 6 6 S2 1449093 Lactococcus cremoris subsp. cremoris IBB477 0.00 1 1 S2 1295826 Lactococcus cremoris subsp. cremoris KW2 0.00 21 3 G1 2643510 unclassified Lactococcus 0.00 11 11 S 3037457 Lactococcus sp. bn62 0.00 7 7 S 2879149 Lactococcus sp. NH2-7C 0.00 11 11 S 1366 Lactococcus raffinolactis 0.00 10 10 S 1363 Lactococcus garvieae 0.00 5 5 S 1151742 Lactococcus taiwanensis 0.00 1 1 S 1281486 Lactococcus formosensis 0.00 1 1 S 2419773 Lactococcus allomyrinae 0.42 1799 70 G 1301 Streptococcus 0.40 1714 1680 S 1308 Streptococcus thermophilus 0.00 8 8 S1 1435972 Streptococcus thermophilus TH985 0.00 7 7 S1 1433289 Streptococcus thermophilus M17PTZA496 0.00 5 5 S1 1435981 Streptococcus thermophilus 1F8CT 0.00 4 4 S1 1051074 Streptococcus thermophilus JIM 8232 0.00 4 4 S1 1435974 Streptococcus thermophilus TH982 0.00 2 2 S1 1423145 Streptococcus thermophilus TH1436 0.00 2 2 S1 1436725 Streptococcus thermophilus TH1477 0.00 1 1 S1 322159 Streptococcus thermophilus LMD-9 0.00 1 1 S1 1433288 Streptococcus thermophilus MTH17CL396 0.00 4 0 G1 119603 Streptococcus dysgalactiae group 0.00 4 2 S 1334 Streptococcus dysgalactiae 0.00 2 2 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae 0.00 3 3 S 1304 Streptococcus salivarius 0.00 2 2 S 82348 Streptococcus pluranimalium 0.00 1 0 S 1318 Streptococcus parasanguinis 0.00 1 1 S1 760570 Streptococcus parasanguinis ATCC 15912 0.00 1 1 S 28037 Streptococcus mitis 0.00 1 1 S 1348 Streptococcus parauberis 0.00 1 1 S 1343 Streptococcus vestibularis 0.00 1 0 S 1305 Streptococcus sanguinis 0.00 1 1 S1 388919 Streptococcus sanguinis SK36 0.00 1 1 S 1303 Streptococcus oralis 0.00 19 1 F 81852 Enterococcaceae 0.00 18 6 G 1350 Enterococcus 0.00 4 3 S 1352 Enterococcus faecium 0.00 1 1 S1 1328870 Enterococcus faecium UC7251 0.00 3 3 S 1351 Enterococcus faecalis 0.00 2 2 S 1805431 Enterococcus saigonensis 0.00 1 1 S 2005703 Enterococcus wangshanyuanii 0.00 1 1 S 37734 Enterococcus casseliflavus 0.00 1 1 S 357441 Enterococcus lactis 0.00 12 0 F 186828 Carnobacteriaceae 0.00 12 0 G 29393 Dolosigranulum 0.00 12 12 S 29394 Dolosigranulum pigrum 0.00 1 0 F 186827 Aerococcaceae 0.00 1 0 G 1375 Aerococcus 0.00 1 1 S 51665 Aerococcus urinaeequi 0.01 44 3 O 1385 Bacillales 0.01 32 4 F 186817 Bacillaceae 0.00 13 0 G 2837504 Heyndrickxia 0.00 13 13 S 1398 Heyndrickxia coagulans 0.00 7 0 G 1906945 Parageobacillus 0.00 2 2 S 1426 Parageobacillus thermoglucosidasius 0.00 2 2 S 81408 Parageobacillus caldoxylosilyticus 0.00 2 1 S 153151 Parageobacillus toebii 0.00 1 1 S1 1223503 Parageobacillus toebii NBRC 107807 0.00 1 1 S 1295642 Parageobacillus genomosp. 1 0.00 3 0 G 150247 Anoxybacillus 0.00 3 3 S 247480 Anoxybacillus caldiproteolyticus 0.00 2 0 G 1386 Bacillus 0.00 1 0 G1 86661 Bacillus cereus group 0.00 1 0 S 1396 Bacillus cereus 0.00 1 1 S1 1003239 Bacillus cereus C1L 0.00 1 0 G1 653685 Bacillus subtilis group 0.00 1 1 S 1423 Bacillus subtilis 0.00 2 0 G 2800373 Priestia 0.00 2 2 S 412384 Priestia aryabhattai 0.00 1 1 G 129337 Geobacillus 0.00 3 0 F 90964 Staphylococcaceae 0.00 3 0 G 1279 Staphylococcus 0.00 1 0 G1 91994 unclassified Staphylococcus 0.00 1 1 S 2025492 Staphylococcus sp. M0911 0.00 1 0 G1 2815305 Staphylococcus intermedius group 0.00 1 1 S 283734 Staphylococcus pseudintermedius 0.00 1 1 S 1286 Staphylococcus simulans 0.00 3 0 F 186822 Paenibacillaceae 0.00 3 0 G 44249 Paenibacillus 0.00 1 1 S 1406 Paenibacillus polymyxa 0.00 1 1 S 1174501 Paenibacillus typhae 0.00 1 0 G1 185978 unclassified Paenibacillus 0.00 1 1 S 2023772 Paenibacillus sp. RUD330 0.00 2 0 F 186821 Sporolactobacillaceae 0.00 1 0 G 2077 Sporolactobacillus 0.00 1 1 S 269673 Sporolactobacillus terrae 0.00 1 0 G 475230 Pullulanibacillus 0.00 1 0 G1 2640606 unclassified Pullulanibacillus 0.00 1 1 S 3028315 Pullulanibacillus sp. KACC 23026 0.00 1 0 F 186823 Alicyclobacillaceae 0.00 1 0 G 29330 Alicyclobacillus 0.00 1 1 S 392011 Alicyclobacillus fastidiosus 0.00 3 0 C 186801 Clostridia 0.00 3 0 O 186802 Eubacteriales 0.00 2 0 F 31979 Clostridiaceae 0.00 1 1 G 1485 Clostridium 0.00 1 0 G 1649459 Hungatella 0.00 1 1 S 384636 Hungatella xylanolytica 0.00 1 0 F 186804 Peptostreptococcaceae 0.00 1 0 G 1870884 Clostridioides 0.00 1 1 S 1496 Clostridioides difficile 0.00 2 0 C 526524 Erysipelotrichia 0.00 2 0 O 526525 Erysipelotrichales 0.00 1 0 F 128827 Erysipelotrichaceae 0.00 1 0 G 2749267 Amedibacterium 0.00 1 1 S 2583452 Amedibacterium intestinale 0.00 1 0 F 2810280 Coprobacillaceae 0.00 1 0 G 135858 Catenibacterium 0.00 1 0 G1 2643636 unclassified Catenibacterium 0.00 1 1 S 2478954 Catenibacterium sp. co_0103 0.00 1 0 C 909932 Negativicutes 0.00 1 0 O 1843489 Veillonellales 0.00 1 0 F 31977 Veillonellaceae 0.00 1 0 G 29465 Veillonella 0.00 1 1 S 423477 Veillonella rogosae 40.04 173097 0 P 201174 Actinomycetota 40.04 173095 45 C 1760 Actinomycetes 40.02 173021 0 O 85004 Bifidobacteriales 40.02 173021 18 F 31953 Bifidobacteriaceae 40.02 173003 128825 G 1678 Bifidobacterium 6.44 27831 26370 S 216816 Bifidobacterium longum 0.18 775 717 S1 1682 Bifidobacterium longum subsp. infantis 0.01 57 57 S2 565040 Bifidobacterium longum subsp. infantis 157F 0.00 1 1 S2 391904 Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 0.14 614 562 S1 1679 Bifidobacterium longum subsp. longum 0.00 17 17 S2 1300227 Bifidobacterium longum subsp. longum GT15 0.00 12 12 S2 722911 Bifidobacterium longum subsp. longum F8 0.00 10 10 S2 890402 Bifidobacterium longum subsp. longum BBMN68 0.00 10 10 S2 1035817 Bifidobacterium longum subsp. longum KACC 91563 0.00 3 3 S2 759350 Bifidobacterium longum subsp. longum JDM301 0.01 25 25 S1 1322347 Bifidobacterium longum E18 0.01 23 23 S1 205913 Bifidobacterium longum DJO10A 0.01 22 22 S1 1931217 Bifidobacterium longum subsp. suillum 0.00 2 2 S1 206672 Bifidobacterium longum NCC2705 3.16 13666 9973 S 28025 Bifidobacterium animalis 0.64 2757 1751 S1 302911 Bifidobacterium animalis subsp. lactis 0.08 358 358 S2 1167629 Bifidobacterium animalis subsp. lactis ATCC 27673 0.05 216 216 S2 1316911 Bifidobacterium animalis subsp. lactis KLDS2.0603 0.03 135 135 S2 1168290 Bifidobacterium animalis subsp. lactis B420 0.02 74 74 S2 442563 Bifidobacterium animalis subsp. lactis AD011 0.01 62 62 S2 555970 Bifidobacterium animalis subsp. lactis DSM 10140 0.01 56 56 S2 1042403 Bifidobacterium animalis subsp. lactis CNCM I-2494 0.01 32 32 S2 580050 Bifidobacterium animalis subsp. lactis Bl-04 0.01 30 30 S2 1075106 Bifidobacterium animalis subsp. lactis BLC1 0.01 25 25 S2 1281781 Bifidobacterium animalis subsp. lactis Bl12 0.00 10 10 S2 573236 Bifidobacterium animalis subsp. lactis V9 0.00 8 8 S2 742729 Bifidobacterium animalis subsp. lactis Bi-07 0.22 936 932 S1 302912 Bifidobacterium animalis subsp. animalis 0.00 4 4 S2 703613 Bifidobacterium animalis subsp. animalis ATCC 25527 0.14 598 478 S 1694 Bifidobacterium pseudolongum 0.01 51 8 S1 1690 Bifidobacterium pseudolongum subsp. globosum 0.01 43 43 S2 1410605 Bifidobacterium pseudolongum subsp. globosum DSM 20092 0.01 50 50 S1 1447715 Bifidobacterium pseudolongum PV8-2 0.00 19 19 S1 31954 Bifidobacterium pseudolongum subsp. pseudolongum 0.09 374 374 S 35760 Bifidobacterium choerinum 0.08 356 130 G1 2608897 unclassified Bifidobacterium 0.01 41 41 S 2983233 Bifidobacterium sp. ESL0790 0.01 39 39 S 2983230 Bifidobacterium sp. ESL0775 0.01 39 39 S 2985571 Bifidobacterium sp. KRGSERBCFTRI 0.00 21 21 S 2983222 Bifidobacterium sp. ESL0732 0.00 16 16 S 2983212 Bifidobacterium sp. ESL0682 0.00 16 16 S 2983214 Bifidobacterium sp. ESL0690 0.00 14 14 S 2983220 Bifidobacterium sp. ESL0728 0.00 12 12 S 2983219 Bifidobacterium sp. ESL0704 0.00 10 10 S 2983229 Bifidobacterium sp. ESL0769 0.00 9 9 S 2983235 Bifidobacterium sp. ESL0798 0.00 5 5 S 2983236 Bifidobacterium sp. ESL0800 0.00 3 3 S 2983228 Bifidobacterium sp. ESL0764 0.00 1 1 S 2922857 Bifidobacterium sp. FKU 0.07 303 291 S 1685 Bifidobacterium breve 0.00 5 5 S1 1385940 Bifidobacterium breve JCM 7019 0.00 3 3 S1 866777 Bifidobacterium breve ACS-071-V-Sch8b 0.00 2 2 S1 1385938 Bifidobacterium breve 12L 0.00 2 2 S1 1385939 Bifidobacterium breve JCM 7017 0.05 197 193 S 1681 Bifidobacterium bifidum 0.00 2 2 S1 702459 Bifidobacterium bifidum PRL2010 0.00 2 2 S1 883062 Bifidobacterium bifidum S17 0.05 196 195 S 1689 Bifidobacterium dentium 0.00 1 1 S1 1150423 Bifidobacterium dentium JCM 1195 = DSM 20436 0.02 81 0 S 158787 Bifidobacterium scardovii 0.02 81 81 S1 1150461 Bifidobacterium scardovii JCM 12489 = DSM 13734 0.02 76 76 S 77635 Bifidobacterium subtile 0.02 66 56 S 1683 Bifidobacterium angulatum 0.00 10 10 S1 518635 Bifidobacterium angulatum DSM 20098 = JCM 7096 0.01 63 0 S 78448 Bifidobacterium pullorum 0.01 63 63 S1 78344 Bifidobacterium pullorum subsp. gallinarum 0.01 60 60 S 33905 Bifidobacterium thermophilum 0.01 59 59 S 28026 Bifidobacterium pseudocatenulatum 0.01 44 44 S 1765219 Bifidobacterium eulemuris 0.01 42 42 S 1603886 Bifidobacterium lemurum 0.01 40 18 S 1686 Bifidobacterium catenulatum 0.00 13 13 S1 1447716 Bifidobacterium catenulatum PV20-2 0.00 9 7 S1 630129 Bifidobacterium catenulatum subsp. kashiwanohense 0.00 2 2 S2 1150460 Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854 0.01 36 36 S 1684 Bifidobacterium asteroides 0.01 31 31 S 1680 Bifidobacterium adolescentis 0.01 22 0 S 638619 Bifidobacterium actinocoloniiforme 0.01 22 22 S1 1437605 Bifidobacterium actinocoloniiforme DSM 22766 0.00 16 16 S 762210 Bifidobacterium saguini 0.00 12 12 S 2020965 Bifidobacterium imperatoris 0.00 6 0 S 1691 Bifidobacterium indicum 0.00 6 6 S1 1341694 Bifidobacterium indicum LMG 11587 = DSM 20214 0.00 3 3 S 1687 Bifidobacterium coryneforme 0.00 12 0 O 85007 Mycobacteriales 0.00 8 0 F 85025 Nocardiaceae 0.00 7 0 G 1827 Rhodococcus 0.00 6 0 S 1828 Rhodococcus fascians 0.00 6 6 S1 1051973 Rhodococcus fascians D188 0.00 1 0 G1 192944 unclassified Rhodococcus (in: high G+C Gram-positive bacteria) 0.00 1 1 S 2499145 Rhodococcus sp. X156 0.00 1 0 G 1817 Nocardia 0.00 1 0 G1 2637762 unclassified Nocardia 0.00 1 1 S 1047172 Nocardia sp. CS682 0.00 3 0 F 1762 Mycobacteriaceae 0.00 3 0 G 1763 Mycobacterium 0.00 1 1 S 482462 Mycobacterium dioxanotrophicus 0.00 1 1 S 39689 Mycobacterium gallinarum 0.00 1 0 G1 77643 Mycobacterium tuberculosis complex 0.00 1 1 S 1773 Mycobacterium tuberculosis 0.00 1 0 F 85028 Tsukamurellaceae 0.00 1 0 G 2060 Tsukamurella 0.00 1 1 S 57704 Tsukamurella tyrosinosolvens 0.00 7 0 O 85006 Micrococcales 0.00 3 0 F 85023 Microbacteriaceae 0.00 2 1 G 33882 Microbacterium 0.00 1 1 S 2708079 Microbacterium fandaimingii 0.00 1 0 G 33886 Rathayibacter 0.00 1 1 S 1671680 Rathayibacter tanaceti 0.00 2 0 F 1268 Micrococcaceae 0.00 1 0 G 32207 Rothia 0.00 1 1 S 172042 Rothia aeria 0.00 1 1 G 1742992 Paenarthrobacter 0.00 1 0 F 1331736 Ruaniaceae 0.00 1 0 G 626119 Ruania 0.00 1 1 S 2603206 Ruania zhangjianzhongii 0.00 1 0 F 1042322 Demequinaceae 0.00 1 0 G 577469 Demequina 0.00 1 0 G1 2620311 unclassified Demequina 0.00 1 1 S 3075619 Demequina sp. OYTSA14 0.00 6 0 O 85009 Propionibacteriales 0.00 6 0 F 31957 Propionibacteriaceae 0.00 6 0 G 1912216 Cutibacterium 0.00 6 6 S 1747 Cutibacterium acnes 0.00 2 0 O 85010 Pseudonocardiales 0.00 2 0 F 2070 Pseudonocardiaceae 0.00 2 0 G 1813 Amycolatopsis 0.00 2 0 G1 2618356 unclassified Amycolatopsis 0.00 2 2 S 3052846 Amycolatopsis sp. DG1A-15b 0.00 1 0 O 85011 Kitasatosporales 0.00 1 0 F 2062 Streptomycetaceae 0.00 1 1 G 1883 Streptomyces 0.00 1 0 O 85012 Streptosporangiales 0.00 1 0 F 2004 Streptosporangiaceae 0.00 1 0 G 83681 Nonomuraea 0.00 1 0 G1 2593643 unclassified Nonomuraea 0.00 1 1 S 1909395 Nonomuraea sp. ATCC 55076 0.00 2 0 C 84998 Coriobacteriia 0.00 1 0 O 84999 Coriobacteriales 0.00 1 0 F 84107 Coriobacteriaceae 0.00 1 0 G 102106 Collinsella 0.00 1 1 S 74426 Collinsella aerofaciens 0.00 1 0 O 1643822 Eggerthellales 0.00 1 0 F 1643826 Eggerthellaceae 0.00 1 0 G 2981344 Xiamenia 0.00 1 1 S 2682776 Xiamenia xianingshaonis 0.02 93 7 P 1224 Pseudomonadota 0.01 49 0 C 28216 Betaproteobacteria 0.01 48 0 O 80840 Burkholderiales 0.01 34 0 F 119060 Burkholderiaceae 0.01 25 4 G 106589 Cupriavidus 0.00 8 8 S 82633 Cupriavidus pauculus 0.00 5 5 S 119219 Cupriavidus metallidurans 0.00 5 0 G1 2640874 unclassified Cupriavidus 0.00 3 3 S 2839983 Cupriavidus sp. EM10 0.00 1 1 S 2027911 Cupriavidus sp. P-10 0.00 1 1 S 3032282 Cupriavidus sp. WKF15 0.00 3 3 S 151783 Cupriavidus campinensis 0.00 5 1 G 48736 Ralstonia 0.00 3 3 S 190721 Ralstonia insidiosa 0.00 1 1 S 1310165 Ralstonia pseudosolanacearum 0.00 2 0 G 32008 Burkholderia 0.00 2 0 G1 2613784 unclassified Burkholderia 0.00 2 2 S 2880219 Burkholderia sp. JSH-S8 0.00 2 0 G 93217 Pandoraea 0.00 2 0 G1 2624094 unclassified Pandoraea 0.00 2 2 S 2518599 Pandoraea sp. XY-2 0.00 6 2 F 80864 Comamonadaceae 0.00 1 0 G 12916 Acidovorax 0.00 1 0 G1 2684926 unclassified Acidovorax 0.00 1 1 S 358220 Acidovorax sp. KKS102 0.00 1 0 G 665874 Limnohabitans 0.00 1 0 G1 2626134 unclassified Limnohabitans 0.00 1 1 S 2986280 Limnohabitans sp. INBF002 0.00 1 0 G 238749 Diaphorobacter 0.00 1 1 S 1288495 Diaphorobacter aerolatus 0.00 1 0 G 47420 Hydrogenophaga 0.00 1 0 G1 2610897 unclassified Hydrogenophaga 0.00 1 1 S 2651974 Hydrogenophaga sp. BPS33 0.00 2 0 F 506 Alcaligenaceae 0.00 1 1 G 222 Achromobacter 0.00 1 0 G 517 Bordetella 0.00 1 1 S 463025 Bordetella bronchialis 0.00 2 1 F 75682 Oxalobacteraceae 0.00 1 1 F1 2895353 Telluria group 0.00 2 0 O1 224471 Burkholderiales genera incertae sedis 0.00 1 0 G 54066 Xylophilus 0.00 1 1 S 2697032 Xylophilus rhododendri 0.00 1 0 G 212743 Rhizobacter 0.00 1 0 G1 2640088 unclassified Rhizobacter 0.00 1 1 S 2753607 Rhizobacter sp. AJA081-3 0.00 2 0 F 2975441 Sphaerotilaceae 0.00 1 0 G 391952 Aquincola 0.00 1 1 S 391953 Aquincola tertiaricarbonis 0.00 1 0 G 1114981 Piscinibacter 0.00 1 0 G1 2627988 unclassified Piscinibacter 0.00 1 1 S 3037797 Piscinibacter sp. XHJ-5 0.00 1 0 O 206389 Rhodocyclales 0.00 1 0 F 2008794 Zoogloeaceae 0.00 1 0 G 2891294 Nitrogeniibacter 0.00 1 1 S 2016596 Nitrogeniibacter mangrovi 0.01 28 0 C 28211 Alphaproteobacteria 0.00 20 0 O 356 Hyphomicrobiales 0.00 12 0 F 41294 Nitrobacteraceae 0.00 9 1 G 374 Bradyrhizobium 0.00 6 2 G1 2631580 unclassified Bradyrhizobium 0.00 2 2 S 1325120 Bradyrhizobium sp. CCBAU 53421 0.00 1 1 S 3049772 Bradyrhizobium sp. NP1 0.00 1 1 S 2782659 Bradyrhizobium sp. 191 0.00 1 1 S 2840469 Bradyrhizobium sediminis 0.00 1 1 S 1549949 Bradyrhizobium vignae 0.00 3 0 G 1073 Rhodopseudomonas 0.00 2 2 S 475937 Rhodopseudomonas boonkerdii 0.00 1 0 S 1076 Rhodopseudomonas palustris 0.00 1 1 S1 316058 Rhodopseudomonas palustris HaA2 0.00 6 0 F 69277 Phyllobacteriaceae 0.00 6 0 G 68287 Mesorhizobium 0.00 5 5 S 2725666 Mesorhizobium terrae 0.00 1 0 G1 325217 unclassified Mesorhizobium 0.00 1 1 S 2744518 Mesorhizobium sp. 131-2-1 0.00 1 0 F 45401 Hyphomicrobiaceae 0.00 1 0 G 81 Hyphomicrobium 0.00 1 0 G1 2619925 unclassified Hyphomicrobium 0.00 1 1 S 717785 Hyphomicrobium sp. MC1 0.00 1 0 F 2821832 Stappiaceae 0.00 1 0 G 227873 Pannonibacter 0.00 1 1 S 121719 Pannonibacter phragmitetus 0.00 2 0 O 204441 Rhodospirillales 0.00 2 0 F 433 Acetobacteraceae 0.00 2 0 G 434 Acetobacter 0.00 2 0 G1 151157 Acetobacter subgen. Acetobacter 0.00 2 1 S 435 Acetobacter aceti 0.00 1 1 S1 887700 Acetobacter aceti NBRC 14818 0.00 2 0 O 204455 Rhodobacterales 0.00 2 0 F 31989 Paracoccaceae 0.00 2 1 G 265 Paracoccus 0.00 1 1 S 34007 Paracoccus versutus 0.00 2 0 O 204457 Sphingomonadales 0.00 2 0 F 41297 Sphingomonadaceae 0.00 2 0 G 13687 Sphingomonas 0.00 2 0 G1 196159 unclassified Sphingomonas 0.00 2 2 S 3014784 Sphingomonas sp. NIBR02145 0.00 2 0 O 204458 Caulobacterales 0.00 2 0 F 76892 Caulobacteraceae 0.00 1 0 G 75 Caulobacter 0.00 1 1 S 155892 Caulobacter vibrioides 0.00 1 0 G 41275 Brevundimonas 0.00 1 0 G1 2622653 unclassified Brevundimonas 0.00 1 1 S 2861285 Brevundimonas sp. PAMC22021 0.00 9 0 C 1236 Gammaproteobacteria 0.00 3 0 O 72274 Pseudomonadales 0.00 3 0 F 135621 Pseudomonadaceae 0.00 3 0 G 286 Pseudomonas 0.00 1 1 S 157783 Pseudomonas cremoricolorata 0.00 1 0 G1 136843 Pseudomonas fluorescens group 0.00 1 1 S 294 Pseudomonas fluorescens 0.00 1 1 G1 196821 unclassified Pseudomonas 0.00 3 0 O 91347 Enterobacterales 0.00 3 0 F 543 Enterobacteriaceae 0.00 1 0 G 547 Enterobacter 0.00 1 0 G1 354276 Enterobacter cloacae complex 0.00 1 1 S 158836 Enterobacter hormaechei 0.00 1 0 F1 2890311 Klebsiella/Raoultella group 0.00 1 0 G 570 Klebsiella 0.00 1 1 S 244366 Klebsiella variicola 0.00 1 0 G 561 Escherichia 0.00 1 0 S 562 Escherichia coli 0.00 1 0 S1 83334 Escherichia coli O157:H7 0.00 1 1 S2 155864 Escherichia coli O157:H7 str. EDL933 0.00 1 0 O 2887326 Moraxellales 0.00 1 0 F 468 Moraxellaceae 0.00 1 1 G 469 Acinetobacter 0.00 1 0 O 135623 Vibrionales 0.00 1 0 F 641 Vibrionaceae 0.00 1 1 G 657 Photobacterium 0.00 1 0 O 135624 Aeromonadales 0.00 1 0 F 84642 Aeromonadaceae 0.00 1 0 G 642 Aeromonas 0.00 1 1 S 654 Aeromonas veronii 0.00 11 0 D1 1783270 FCB group 0.00 11 0 D2 68336 Bacteroidota/Chlorobiota group 0.00 11 0 P 976 Bacteroidota 0.00 8 0 C 117743 Flavobacteriia 0.00 8 0 O 200644 Flavobacteriales 0.00 7 0 F 49546 Flavobacteriaceae 0.00 6 0 G 178469 Arenibacter 0.00 6 6 S 616991 Arenibacter algicola 0.00 1 0 G 52959 Polaribacter 0.00 1 0 G1 196858 unclassified Polaribacter 0.00 1 1 S 2806551 Polaribacter sp. Q13 0.00 1 0 F 2762318 Weeksellaceae 0.00 1 0 F1 2782232 Chryseobacterium group 0.00 1 0 G 59732 Chryseobacterium 0.00 1 1 S 254 Chryseobacterium indoltheticum 0.00 3 0 C 768503 Cytophagia 0.00 3 0 O 768507 Cytophagales 0.00 1 0 F 89373 Cytophagaceae 0.00 1 0 G 107 Spirosoma 0.00 1 0 G1 2621999 unclassified Spirosoma 0.00 1 1 S 2745947 Spirosoma sp. KUDC1026 0.00 1 0 F 1853232 Hymenobacteraceae 0.00 1 0 G 89966 Hymenobacter 0.00 1 1 S 2932254 Hymenobacter volaticus 0.00 1 0 F 2762301 Marivirgaceae 0.00 1 1 G 869806 Marivirga 0.00 2 0 P 2818505 Myxococcota 0.00 2 0 C 32015 Myxococcia 0.00 2 0 O 29 Myxococcales 0.00 2 0 O1 80811 Cystobacterineae 0.00 1 1 F 39 Archangiaceae 0.00 1 0 F 1524213 Vulgatibacteraceae 0.00 1 0 G 1524214 Vulgatibacter 0.00 1 1 S 1391653 Vulgatibacter incomptus 0.00 1 0 P 29547 Campylobacterota 0.00 1 0 C 3031852 Epsilonproteobacteria 0.00 1 0 O 213849 Campylobacterales 0.00 1 0 F 72294 Campylobacteraceae 0.00 1 0 G 194 Campylobacter 0.00 1 1 S 197 Campylobacter jejuni 0.00 1 0 P 200940 Thermodesulfobacteriota 0.00 1 0 C 3031451 Desulfobulbia 0.00 1 0 O 3024411 Desulfobulbales 0.00 1 0 F 2886822 Desulfocapsaceae 0.00 1 0 G 2886823 Desulfosediminicola 0.00 1 1 S 2569541 Desulfosediminicola flagellatus 0.00 21 0 D 2759 Eukaryota 0.00 21 0 D1 33154 Opisthokonta 0.00 21 0 K 33208 Metazoa 0.00 21 0 K1 6072 Eumetazoa 0.00 21 0 K2 33213 Bilateria 0.00 21 0 K3 33511 Deuterostomia 0.00 21 0 P 7711 Chordata 0.00 21 0 P1 89593 Craniata 0.00 21 0 P2 7742 Vertebrata 0.00 21 0 P3 7776 Gnathostomata 0.00 21 0 P4 117570 Teleostomi 0.00 21 0 P5 117571 Euteleostomi 0.00 21 0 P6 8287 Sarcopterygii 0.00 21 0 P7 1338369 Dipnotetrapodomorpha 0.00 21 0 P8 32523 Tetrapoda 0.00 21 0 P9 32524 Amniota 0.00 21 0 C 40674 Mammalia 0.00 21 0 C1 32525 Theria 0.00 21 0 C2 9347 Eutheria 0.00 21 0 C3 1437010 Boreoeutheria 0.00 21 0 C4 314146 Euarchontoglires 0.00 21 0 O 9443 Primates 0.00 21 0 O1 376913 Haplorrhini 0.00 21 0 O2 314293 Simiiformes 0.00 21 0 O3 9526 Catarrhini 0.00 21 0 O4 314295 Hominoidea 0.00 21 0 F 9604 Hominidae 0.00 21 0 F1 207598 Homininae 0.00 21 0 G 9605 Homo 0.00 21 21 S 9606 Homo sapiens 0.00 16 0 D 10239 Viruses 0.00 16 0 D1 2731341 Duplodnaviria 0.00 16 0 K 2731360 Heunggongvirae 0.00 16 0 P 2731618 Uroviricota 0.00 16 2 C 2731619 Caudoviricetes 0.00 9 0 G 2843397 Junavirus 0.00 9 0 S 2845134 Junavirus LJ 0.00 9 9 S1 2041454 Lactobacillus phage LJ 0.00 2 0 G 2843368 Colunavirus 0.00 1 0 S 2845130 Colunavirus CL1 0.00 1 1 S1 1739607 Lactobacillus phage CL1 0.00 1 0 S 2845145 Colunavirus iLp1308 0.00 1 1 S1 1739611 Lactobacillus phage iLp1308 0.00 1 0 C1 2788787 unclassified Caudoviricetes 0.00 1 1 S 201847 Lactococcus phage 4268 0.00 1 0 G 2843349 Ashduovirus 0.00 1 0 S 2845128 Ashduovirus A2 0.00 1 1 S1 51369 Lactobacillus phage A2 0.00 1 0 G 2843449 Sandinevirus 0.00 1 0 S 2845191 Sandinevirus BK5T 0.00 1 1 S1 31754 Lactococcus phage BK5-T