2.62 7803 7803 U 0 unclassified 97.38 290154 244 R 1 root 97.30 289908 0 R1 131567 cellular organisms 97.29 289869 46 D 2 Bacteria 97.17 289535 24 D1 1783272 Terrabacteria group 70.70 210670 5 P 201174 Actinomycetota 70.70 210665 77 C 1760 Actinomycetes 70.66 210523 0 O 85004 Bifidobacteriales 70.66 210523 21 F 31953 Bifidobacteriaceae 70.65 210499 37789 G 1678 Bifidobacterium 57.70 171909 170557 S 1681 Bifidobacterium bifidum 0.24 713 713 S1 883062 Bifidobacterium bifidum S17 0.19 552 552 S1 702459 Bifidobacterium bifidum PRL2010 0.02 68 68 S1 500634 Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 0.01 19 19 S1 484020 Bifidobacterium bifidum BGN4 0.08 237 195 S 216816 Bifidobacterium longum 0.01 22 20 S1 1679 Bifidobacterium longum subsp. longum 0.00 1 1 S2 565042 Bifidobacterium longum subsp. longum JCM 1217 0.00 1 1 S2 722911 Bifidobacterium longum subsp. longum F8 0.01 20 20 S1 1682 Bifidobacterium longum subsp. infantis 0.03 84 27 G1 2608897 unclassified Bifidobacterium 0.01 16 16 S 2983233 Bifidobacterium sp. ESL0790 0.00 12 12 S 2983212 Bifidobacterium sp. ESL0682 0.00 6 6 S 2983222 Bifidobacterium sp. ESL0732 0.00 5 5 S 2983229 Bifidobacterium sp. ESL0769 0.00 5 5 S 2983230 Bifidobacterium sp. ESL0775 0.00 4 4 S 2983236 Bifidobacterium sp. ESL0800 0.00 2 2 S 2922859 Bifidobacterium sp. SKU 0.00 2 2 S 2983220 Bifidobacterium sp. ESL0728 0.00 1 1 S 2922858 Bifidobacterium sp. TKU 0.00 1 1 S 2983214 Bifidobacterium sp. ESL0690 0.00 1 1 S 2983219 Bifidobacterium sp. ESL0704 0.00 1 1 S 2983228 Bifidobacterium sp. ESL0764 0.00 1 1 S 2983235 Bifidobacterium sp. ESL0798 0.03 82 79 S 1685 Bifidobacterium breve 0.00 1 1 S1 936351 Bifidobacterium breve S27 0.00 1 1 S1 1385939 Bifidobacterium breve JCM 7017 0.00 1 1 S1 1385940 Bifidobacterium breve JCM 7019 0.02 74 0 S 158787 Bifidobacterium scardovii 0.02 74 74 S1 1150461 Bifidobacterium scardovii JCM 12489 = DSM 13734 0.01 39 26 S 28025 Bifidobacterium animalis 0.00 13 7 S1 302911 Bifidobacterium animalis subsp. lactis 0.00 3 3 S2 1316911 Bifidobacterium animalis subsp. lactis KLDS2.0603 0.00 2 2 S2 1167629 Bifidobacterium animalis subsp. lactis ATCC 27673 0.00 1 1 S2 1168290 Bifidobacterium animalis subsp. lactis B420 0.01 31 0 S 78448 Bifidobacterium pullorum 0.01 31 31 S1 78344 Bifidobacterium pullorum subsp. gallinarum 0.01 29 29 S 1680 Bifidobacterium adolescentis 0.01 27 25 S 1683 Bifidobacterium angulatum 0.00 2 2 S1 518635 Bifidobacterium angulatum DSM 20098 = JCM 7096 0.01 26 26 S 28026 Bifidobacterium pseudocatenulatum 0.01 23 23 S 1689 Bifidobacterium dentium 0.01 20 17 S 1694 Bifidobacterium pseudolongum 0.00 1 0 S1 1690 Bifidobacterium pseudolongum subsp. globosum 0.00 1 1 S2 1410605 Bifidobacterium pseudolongum subsp. globosum DSM 20092 0.00 1 1 S1 31954 Bifidobacterium pseudolongum subsp. pseudolongum 0.00 1 1 S1 1447715 Bifidobacterium pseudolongum PV8-2 0.01 19 19 S 33905 Bifidobacterium thermophilum 0.01 18 18 S 77635 Bifidobacterium subtile 0.01 17 17 S 1603886 Bifidobacterium lemurum 0.01 17 17 S 1684 Bifidobacterium asteroides 0.00 14 6 S 1686 Bifidobacterium catenulatum 0.00 4 3 S1 630129 Bifidobacterium catenulatum subsp. kashiwanohense 0.00 1 1 S2 1150460 Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854 0.00 4 4 S1 1447716 Bifidobacterium catenulatum PV20-2 0.00 13 13 S 1765219 Bifidobacterium eulemuris 0.00 12 0 S 638619 Bifidobacterium actinocoloniiforme 0.00 12 12 S1 1437605 Bifidobacterium actinocoloniiforme DSM 22766 0.00 11 11 S 35760 Bifidobacterium choerinum 0.00 4 4 S 762210 Bifidobacterium saguini 0.00 3 3 S 2020965 Bifidobacterium imperatoris 0.00 1 1 S 1687 Bifidobacterium coryneforme 0.00 3 0 G 2701 Gardnerella 0.00 2 2 S 2702 Gardnerella vaginalis 0.00 1 1 S 2792979 Gardnerella swidsinskii 0.01 27 1 O 85007 Mycobacteriales 0.01 18 0 F 85025 Nocardiaceae 0.01 18 0 G 1827 Rhodococcus 0.01 18 3 S 1828 Rhodococcus fascians 0.00 12 12 S1 1051973 Rhodococcus fascians D188 0.00 2 2 S1 1443893 Rhodococcus fascians A21d2 0.00 1 1 S1 1443894 Rhodococcus fascians A25f 0.00 7 0 F 1653 Corynebacteriaceae 0.00 7 4 G 1716 Corynebacterium 0.00 1 0 S 234828 Corynebacterium caspium 0.00 1 1 S1 1121355 Corynebacterium caspium DSM 44850 0.00 1 1 S 38289 Corynebacterium jeikeium 0.00 1 1 S 394964 Corynebacterium hansenii 0.00 1 0 F 1762 Mycobacteriaceae 0.00 1 0 G 1763 Mycobacterium 0.00 1 1 S 1780 Mycobacterium malmoense 0.01 17 0 O 85006 Micrococcales 0.00 9 0 F 85023 Microbacteriaceae 0.00 6 0 G 33882 Microbacterium 0.00 6 0 G1 2609290 unclassified Microbacterium 0.00 2 2 S 3025663 Microbacterium sp. Clip185 0.00 1 1 S 2763257 Microbacterium sp. YJN-G 0.00 1 1 S 1906742 Microbacterium sp. BH-3-3-3 0.00 1 1 S 2875948 Microbacterium sp. cx-55 0.00 1 1 S 2489212 Microbacterium sp. RG1 0.00 1 0 G 447237 Frondihabitans 0.00 1 1 S 1268041 Frondihabitans sucicola 0.00 1 0 G 881616 Herbiconiux 0.00 1 0 G1 2618217 unclassified Herbiconiux 0.00 1 1 S 2735133 Herbiconiux sp. SALV-R1 0.00 1 0 G 1649457 Homoserinibacter 0.00 1 0 G1 2649549 unclassified Homoserinibacter 0.00 1 1 S 2985506 Homoserinibacter sp. YIM 151385 0.00 4 1 F 1268 Micrococcaceae 0.00 2 0 G 1663 Arthrobacter 0.00 2 2 S 199136 Arthrobacter koreensis 0.00 1 0 G 32207 Rothia 0.00 1 1 S 37923 Rothia kristinae 0.00 2 0 F 85020 Dermabacteraceae 0.00 2 0 G 43668 Brachybacterium 0.00 2 0 S 43669 Brachybacterium faecium 0.00 2 2 S1 446465 Brachybacterium faecium DSM 4810 0.00 1 0 F 85016 Cellulomonadaceae 0.00 1 0 G 1707 Cellulomonas 0.00 1 1 G1 2620175 unclassified Cellulomonas 0.00 1 0 F 85021 Intrasporangiaceae 0.00 1 0 G 53457 Janibacter 0.00 1 1 S 53458 Janibacter limosus 0.00 7 0 O 85009 Propionibacteriales 0.00 6 0 F 31957 Propionibacteriaceae 0.00 6 0 G 1912216 Cutibacterium 0.00 6 6 S 1747 Cutibacterium acnes 0.00 1 0 F 85015 Nocardioidaceae 0.00 1 0 G 1839 Nocardioides 0.00 1 0 G1 2615069 unclassified Nocardioides 0.00 1 1 S 2760705 Nocardioides sp. InS609-2 0.00 7 0 O 85011 Kitasatosporales 0.00 7 0 F 2062 Streptomycetaceae 0.00 5 0 G 1883 Streptomyces 0.00 2 1 G1 2593676 unclassified Streptomyces 0.00 1 1 S 2695266 Streptomyces sp. HM190 0.00 1 1 S 1971 Streptomyces noursei 0.00 1 0 S 33903 Streptomyces avermitilis 0.00 1 1 S1 227882 Streptomyces avermitilis MA-4680 = NBRC 14893 0.00 1 1 S 1942 Streptomyces goshikiensis 0.00 1 0 G 2063 Kitasatospora 0.00 1 0 S 2066 Kitasatospora setae 0.00 1 1 S1 452652 Kitasatospora setae KM-6054 0.00 1 0 G 2995704 Peterkaempfera 0.00 1 1 S 2126346 Peterkaempfera bronchialis 0.00 3 0 O 85008 Micromonosporales 0.00 3 0 F 28056 Micromonosporaceae 0.00 2 0 G 1873 Micromonospora 0.00 2 1 G1 2617518 unclassified Micromonospora 0.00 1 1 S 3015152 Micromonospora sp. WMMD812 0.00 1 0 G 1865 Actinoplanes 0.00 1 0 S 1866 Actinoplanes missouriensis 0.00 1 1 S1 512565 Actinoplanes missouriensis 431 0.00 3 0 O 85010 Pseudonocardiales 0.00 3 0 F 2070 Pseudonocardiaceae 0.00 2 0 G 1813 Amycolatopsis 0.00 1 0 G1 2618356 unclassified Amycolatopsis 0.00 1 1 S 2653857 Amycolatopsis sp. YIM 10 0.00 1 0 G1 2893674 Amycolatopsis methanolica group 0.00 1 0 S 1814 Amycolatopsis methanolica 0.00 1 1 S1 1068978 Amycolatopsis methanolica 239 0.00 1 0 G 39845 Actinokineospora 0.00 1 0 G1 2642662 unclassified Actinokineospora 0.00 1 1 S 2268449 Actinokineospora sp. UTMC 2448 0.00 1 0 O 2037 Actinomycetales 0.00 1 0 F 2049 Actinomycetaceae 0.00 1 0 G 28263 Arcanobacterium 0.00 1 1 S 28264 Arcanobacterium haemolyticum 26.46 78837 1 P 1239 Bacillota 26.46 78834 42 C 91061 Bacilli 26.44 78785 77 O 186826 Lactobacillales 23.60 70308 507 F 33958 Lactobacillaceae 23.18 69068 1248 G 2759736 Lacticaseibacillus 22.69 67593 67473 S 47715 Lacticaseibacillus rhamnosus 0.01 39 39 S1 1088720 Lacticaseibacillus rhamnosus ATCC 8530 0.01 33 33 S1 568704 Lacticaseibacillus rhamnosus Lc 705 0.01 27 27 S1 568703 Lacticaseibacillus rhamnosus GG 0.00 14 14 S1 1380361 Lacticaseibacillus rhamnosus DSM 14870 0.00 4 4 S1 1316933 Lacticaseibacillus rhamnosus LOCK900 0.00 3 3 S1 1318634 Lacticaseibacillus rhamnosus LOCK908 0.07 214 187 S 1597 Lacticaseibacillus paracasei 0.01 18 18 S1 113557 Lacticaseibacillus paracasei subsp. tolerans 0.00 6 6 S1 47714 Lacticaseibacillus paracasei subsp. paracasei 0.00 2 2 S1 1446494 Lacticaseibacillus paracasei N1115 0.00 1 1 S1 321967 Lacticaseibacillus paracasei ATCC 334 0.00 9 9 S 1582 Lacticaseibacillus casei 0.00 2 0 G1 2759744 unclassified Lacticaseibacillus 0.00 2 2 S 3068305 Lacticaseibacillus sp. NCIMB 15471 0.00 1 1 S 88233 Lacticaseibacillus manihotivorans 0.00 1 1 S 2100821 Lacticaseibacillus chiayiensis 0.11 328 46 G 2767842 Lactiplantibacillus 0.09 278 267 S 1590 Lactiplantibacillus plantarum 0.00 11 11 S1 337330 Lactiplantibacillus plantarum subsp. plantarum 0.00 2 1 S 1589 Lactiplantibacillus pentosus 0.00 1 1 S1 1136177 Lactiplantibacillus pentosus KCA1 0.00 1 1 S 60520 Lactiplantibacillus paraplantarum 0.00 1 1 S 271881 Lactiplantibacillus argentoratensis 0.08 246 2 G 1578 Lactobacillus 0.06 192 192 S 1579 Lactobacillus acidophilus 0.01 38 38 S 1587 Lactobacillus helveticus 0.00 8 3 S 1584 Lactobacillus delbrueckii 0.00 3 3 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus 0.00 1 1 S1 29397 Lactobacillus delbrueckii subsp. lactis 0.00 1 1 S1 249265 Lactobacillus delbrueckii subsp. indicus 0.00 2 1 S 1604 Lactobacillus amylovorus 0.00 1 1 S1 1423723 Lactobacillus amylovorus DSM 20531 0.00 1 1 G1 2620435 unclassified Lactobacillus 0.00 1 0 S 267818 Lactobacillus kefiranofaciens 0.00 1 1 S1 190906 Lactobacillus kefiranofaciens subsp. kefirgranum 0.00 1 1 S 147802 Lactobacillus iners 0.00 1 1 S 1600 Lactobacillus acetotolerans 0.04 125 1 G 2767887 Ligilactobacillus 0.04 124 123 S 1624 Ligilactobacillus salivarius 0.00 1 1 S1 362948 Ligilactobacillus salivarius UCC118 0.00 13 1 G 2767893 Lentilactobacillus 0.00 12 12 S 1581 Lentilactobacillus buchneri 0.00 6 1 G 1253 Pediococcus 0.00 2 2 S 1255 Pediococcus pentosaceus 0.00 2 0 G1 1670797 Pediococcus acidilactici group 0.00 2 2 S 1254 Pediococcus acidilactici 0.00 1 0 S 187452 Pediococcus claussenii 0.00 1 1 S1 701521 Pediococcus claussenii ATCC BAA-344 0.00 5 0 G 2767885 Latilactobacillus 0.00 4 4 S 1599 Latilactobacillus sakei 0.00 1 1 S 28038 Latilactobacillus curvatus 0.00 2 1 G 1243 Leuconostoc 0.00 1 1 S 255248 Leuconostoc garlicum 0.00 1 0 G 2767881 Fructilactobacillus 0.00 1 1 S 53444 Fructilactobacillus lindneri 0.00 1 0 G 2767892 Secundilactobacillus 0.00 1 1 S 240427 Secundilactobacillus paracollinoides 0.00 1 0 G 2767889 Loigolactobacillus 0.00 1 0 S 1610 Loigolactobacillus coryniformis 0.00 1 0 S1 115541 Loigolactobacillus coryniformis subsp. coryniformis 0.00 1 1 S2 913848 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 0.00 1 0 G 2767888 Liquorilactobacillus 0.00 1 1 S 82688 Liquorilactobacillus nagelii 0.00 1 0 G 2767886 Levilactobacillus 0.00 1 1 S 1580 Levilactobacillus brevis 0.00 1 1 G 2767878 Bombilactobacillus 0.00 1 0 G 2742598 Limosilactobacillus 0.00 1 1 S 1613 Limosilactobacillus fermentum 0.00 1 0 G 46255 Weissella 0.00 1 1 S 1249 Weissella paramesenteroides 2.82 8399 30 F 1300 Streptococcaceae 2.80 8336 297 G 1301 Streptococcus 2.69 8021 7897 S 1308 Streptococcus thermophilus 0.01 26 26 S1 1435981 Streptococcus thermophilus 1F8CT 0.01 21 21 S1 1435974 Streptococcus thermophilus TH982 0.01 19 19 S1 1433289 Streptococcus thermophilus M17PTZA496 0.01 16 16 S1 1435972 Streptococcus thermophilus TH985 0.00 11 11 S1 1423145 Streptococcus thermophilus TH1436 0.00 8 8 S1 264199 Streptococcus thermophilus LMG 18311 0.00 5 5 S1 1408178 Streptococcus thermophilus ASCC 1275 0.00 4 4 S1 1433288 Streptococcus thermophilus MTH17CL396 0.00 4 4 S1 1436725 Streptococcus thermophilus TH1477 0.00 3 3 S1 767463 Streptococcus thermophilus ND03 0.00 3 3 S1 1051074 Streptococcus thermophilus JIM 8232 0.00 2 2 S1 322159 Streptococcus thermophilus LMD-9 0.00 2 2 S1 1187956 Streptococcus thermophilus MN-ZLW-002 0.00 3 3 S 1304 Streptococcus salivarius 0.00 2 2 S 1314 Streptococcus pyogenes 0.00 1 1 S 1313 Streptococcus pneumoniae 0.00 1 1 S 1343 Streptococcus vestibularis 0.00 1 1 S 2173853 Streptococcus chenjunshii 0.00 1 0 G1 119603 Streptococcus dysgalactiae group 0.00 1 0 S 1336 Streptococcus equi 0.00 1 1 S1 40041 Streptococcus equi subsp. zooepidemicus 0.00 1 1 S 1335 Streptococcus equinus 0.00 1 1 S 28037 Streptococcus mitis 0.00 1 0 G1 2608887 unclassified Streptococcus 0.00 1 1 S 2664091 Streptococcus sp. zg-86 0.00 1 1 S 1346 Streptococcus iniae 0.00 1 1 S 1311 Streptococcus agalactiae 0.00 1 1 S 1310 Streptococcus sobrinus 0.00 1 1 S 315405 Streptococcus gallolyticus 0.00 1 1 S 1307 Streptococcus suis 0.00 1 1 S 1305 Streptococcus sanguinis 0.01 33 6 G 1357 Lactococcus 0.01 26 21 S 1358 Lactococcus lactis 0.00 5 5 S1 1360 Lactococcus lactis subsp. lactis 0.00 1 1 S 1359 Lactococcus cremoris 0.00 1 0 F 186828 Carnobacteriaceae 0.00 1 0 G 82800 Desemzia 0.00 1 1 S 82801 Desemzia incerta 0.00 7 0 O 1385 Bacillales 0.00 7 0 F 186817 Bacillaceae 0.00 5 0 G 1386 Bacillus 0.00 4 0 G1 86661 Bacillus cereus group 0.00 3 1 S 1396 Bacillus cereus 0.00 1 1 S1 1454382 Bacillus cereus D17 0.00 1 1 S1 526969 Bacillus cereus m1550 0.00 1 1 S 1428 Bacillus thuringiensis 0.00 1 1 S 1479 Bacillus smithii 0.00 1 0 G 2837504 Heyndrickxia 0.00 1 1 S 1398 Heyndrickxia coagulans 0.00 1 0 G 2837485 Evansella 0.00 1 0 G1 2837486 unclassified Evansella 0.00 1 1 S 2924033 Evansella sp. LMS18 0.00 2 0 C 186801 Clostridia 0.00 2 0 O 186802 Eubacteriales 0.00 1 0 F 186804 Peptostreptococcaceae 0.00 1 0 G 1870884 Clostridioides 0.00 1 1 S 1496 Clostridioides difficile 0.00 1 0 F 31979 Clostridiaceae 0.00 1 0 G 1485 Clostridium 0.00 1 1 S 1509 Clostridium sporogenes 0.00 4 0 D2 1798711 Cyanobacteriota/Melainabacteria group 0.00 4 0 P 1117 Cyanobacteriota 0.00 4 0 C 3028117 Cyanophyceae 0.00 3 0 O 1161 Nostocales 0.00 3 0 F 1162 Nostocaceae 0.00 3 0 G 1177 Nostoc 0.00 3 0 G1 2593658 unclassified Nostoc 0.00 3 3 S 2576903 Nostoc sp. C057 0.00 1 0 O 2881377 Pseudanabaenales 0.00 1 0 F 2881378 Thermosynechococcaceae 0.00 1 0 G 146785 Thermosynechococcus 0.00 1 0 S 146786 Thermosynechococcus vestitus 0.00 1 1 S1 2016101 Thermosynechococcus vestitus E542 0.09 282 4 P 1224 Pseudomonadota 0.04 132 1 C 28216 Betaproteobacteria 0.04 130 8 O 80840 Burkholderiales 0.03 81 2 F 119060 Burkholderiaceae 0.02 66 13 G 106589 Cupriavidus 0.01 19 19 S 119219 Cupriavidus metallidurans 0.01 15 0 G1 2640874 unclassified Cupriavidus 0.00 11 11 S 2839983 Cupriavidus sp. EM10 0.00 2 2 S 3032282 Cupriavidus sp. WKF15 0.00 1 1 S 2027911 Cupriavidus sp. P-10 0.00 1 1 S 2920269 Cupriavidus sp. U2 0.00 12 12 S 82633 Cupriavidus pauculus 0.00 3 3 S 151783 Cupriavidus campinensis 0.00 1 1 S 68895 Cupriavidus basilensis 0.00 1 0 S 106590 Cupriavidus necator 0.00 1 1 S1 1042878 Cupriavidus necator N-1 0.00 1 1 S 248026 Cupriavidus pinatubonensis 0.00 1 1 S 1796606 Cupriavidus nantongensis 0.00 8 0 G 48736 Ralstonia 0.00 6 6 S 190721 Ralstonia insidiosa 0.00 1 1 S 1310165 Ralstonia pseudosolanacearum 0.00 1 1 S 3037696 Ralstonia nicotianae 0.00 3 0 G 32008 Burkholderia 0.00 3 0 G1 87882 Burkholderia cepacia complex 0.00 1 1 S 60550 Burkholderia pyrrocinia 0.00 1 1 S 152480 Burkholderia ambifaria 0.00 1 1 S 488447 Burkholderia contaminans 0.00 2 0 G 1822464 Paraburkholderia 0.00 1 0 G1 2615204 unclassified Paraburkholderia 0.00 1 1 S 3034358 Paraburkholderia sp. SUR17 0.00 1 1 S 134537 Paraburkholderia fungorum 0.01 23 5 F 80864 Comamonadaceae 0.00 4 2 G 34072 Variovorax 0.00 2 1 G1 663243 unclassified Variovorax 0.00 1 1 S 2762323 Variovorax sp. PAMC28562 0.00 4 0 G 283 Comamonas 0.00 1 1 S 1082851 Comamonas serinivorans 0.00 1 1 S 2597701 Comamonas flocculans 0.00 1 0 G1 2638500 unclassified Comamonas 0.00 1 1 S 2853163 Comamonas sp. NLF-1-9 0.00 1 1 S 2743470 Comamonas antarctica 0.00 2 0 G 12916 Acidovorax 0.00 1 1 S 553814 Acidovorax carolinensis 0.00 1 0 G1 2684926 unclassified Acidovorax 0.00 1 1 S 2940492 Acidovorax sp. GBBC 1281 0.00 2 0 G 3051137 Paracidovorax 0.00 2 2 S 80867 Paracidovorax avenae 0.00 2 0 G 683756 Kinneretia 0.00 2 0 G1 2632542 unclassified Kinneretia 0.00 2 2 S 2714952 Kinneretia sp. DAIF2 0.00 2 2 G 80865 Delftia 0.00 1 0 G 238749 Diaphorobacter 0.00 1 1 G1 2649760 unclassified Diaphorobacter 0.00 1 0 G 47420 Hydrogenophaga 0.00 1 0 G1 2610897 unclassified Hydrogenophaga 0.00 1 1 S 2806347 Hydrogenophaga sp. SL48 0.00 10 2 O1 224471 Burkholderiales genera incertae sedis 0.00 4 0 G 92793 Aquabacterium 0.00 4 4 S 1296669 Aquabacterium olei 0.00 3 0 G 318147 Paucibacter 0.00 2 0 G1 2642959 unclassified Paucibacter 0.00 1 1 S 1768242 Paucibacter sp. KCTC 42545 0.00 1 1 S 3019553 Paucibacter sp. S2-9 0.00 1 1 S 2070761 Paucibacter aquatile 0.00 1 0 G 54066 Xylophilus 0.00 1 1 S 2697032 Xylophilus rhododendri 0.00 4 0 F 2975441 Sphaerotilaceae 0.00 1 0 G 28067 Rubrivivax 0.00 1 0 S 28068 Rubrivivax gelatinosus 0.00 1 1 S1 983917 Rubrivivax gelatinosus IL144 0.00 1 0 G 196013 Caldimonas 0.00 1 1 S 413882 Caldimonas brevitalea 0.00 1 0 G 316612 Methylibium 0.00 1 0 G1 2633235 unclassified Methylibium 0.00 1 1 S 2082386 Methylibium sp. Pch-M 0.00 1 0 G 391952 Aquincola 0.00 1 1 S 391953 Aquincola tertiaricarbonis 0.00 2 0 F 506 Alcaligenaceae 0.00 1 0 G 222 Achromobacter 0.00 1 1 S 85698 Achromobacter xylosoxidans 0.00 1 0 G 152267 Pigmentiphaga 0.00 1 0 G1 2626614 unclassified Pigmentiphaga 0.00 1 1 S 2488560 Pigmentiphaga sp. H8 0.00 2 0 F 75682 Oxalobacteraceae 0.00 1 0 G 963 Herbaspirillum 0.00 1 1 S 2014887 Herbaspirillum robiniae 0.00 1 0 G 29580 Janthinobacterium 0.00 1 0 G1 2610881 unclassified Janthinobacterium 0.00 1 1 S 3065910 Janthinobacterium sp. J1-1 0.00 1 0 O 32003 Nitrosomonadales 0.00 1 0 F 2008793 Sterolibacteriaceae 0.00 1 0 G 378210 Methyloversatilis 0.00 1 0 G1 2639971 unclassified Methyloversatilis 0.00 1 1 S 1842540 Methyloversatilis sp. RAC08 0.04 131 1 C 28211 Alphaproteobacteria 0.03 94 1 O 356 Hyphomicrobiales 0.02 66 7 F 41294 Nitrobacteraceae 0.02 53 17 G 374 Bradyrhizobium 0.01 25 2 G1 2631580 unclassified Bradyrhizobium 0.00 8 8 S 2057741 Bradyrhizobium sp. SK17 0.00 2 2 S 1325102 Bradyrhizobium sp. CCBAU 51765 0.00 2 2 S 2898149 Bradyrhizobium sp. A19 0.00 2 2 S 2976823 Bradyrhizobium sp. CB1024 0.00 1 1 S 3039159 Bradyrhizobium sp. CB82 0.00 1 1 S 115808 Bradyrhizobium sp. ORS 285 0.00 1 1 S 574727 Bradyrhizobium sp. C-145 0.00 1 1 S 858422 Bradyrhizobium sp. CCBAU 051011 0.00 1 1 S 1197460 Bradyrhizobium sp. 6(2017) 0.00 1 1 S 1404888 Bradyrhizobium sp. 1(2017) 0.00 1 1 S 1404443 Bradyrhizobium sp. 41S5 0.00 1 1 S 83637 Bradyrhizobium genosp. L 0.00 1 1 S 1325120 Bradyrhizobium sp. CCBAU 53421 0.00 2 2 S 2840469 Bradyrhizobium sediminis 0.00 2 2 S 244734 Bradyrhizobium betae 0.00 2 2 S 1437360 Bradyrhizobium erythrophlei 0.00 1 1 S 83627 Bradyrhizobium commune 0.00 1 1 S 2821406 Bradyrhizobium australafricanum 0.00 1 1 S 375 Bradyrhizobium japonicum 0.00 1 1 S 722472 Bradyrhizobium lablabi 0.00 1 1 S 1325090 Bradyrhizobium guangdongense 0.00 4 0 G 1073 Rhodopseudomonas 0.00 4 1 S 1076 Rhodopseudomonas palustris 0.00 3 3 S1 316058 Rhodopseudomonas palustris HaA2 0.00 2 0 G 1033 Afipia 0.00 1 1 S 40137 Afipia carboxidovorans 0.00 1 0 G1 2642050 unclassified Afipia 0.00 1 1 S 1320552 Afipia sp. NBIMC_P1-C1 0.01 25 1 F 69277 Phyllobacteriaceae 0.01 24 1 G 68287 Mesorhizobium 0.01 23 23 S 2725666 Mesorhizobium terrae 0.00 1 0 F 82115 Rhizobiaceae 0.00 1 0 F1 227290 Rhizobium/Agrobacterium group 0.00 1 0 G 379 Rhizobium 0.00 1 0 G1 2613769 unclassified Rhizobium 0.00 1 1 S 2795216 Rhizobium sp. AB2/73 0.00 1 0 F 2831100 Boseaceae 0.00 1 0 G 85413 Bosea 0.00 1 1 S 1526658 Bosea vaviloviae 0.01 26 0 O 204457 Sphingomonadales 0.01 25 2 F 41297 Sphingomonadaceae 0.01 22 0 G 13687 Sphingomonas 0.01 20 3 G1 196159 unclassified Sphingomonas 0.00 13 13 S 3014784 Sphingomonas sp. NIBR02145 0.00 1 1 S 399176 Sphingomonas sp. R1 0.00 1 1 S 2219696 Sphingomonas sp. FARSPH 0.00 1 1 S 1938607 Sphingomonas sp. LM7 0.00 1 1 S 2950605 Sphingomonas sp. QA11 0.00 1 0 S 397260 Sphingomonas sanxanigenens 0.00 1 1 S1 1123269 Sphingomonas sanxanigenens DSM 19645 = NX02 0.00 1 1 S 653931 Sphingomonas alpina 0.00 1 0 G 165695 Sphingobium 0.00 1 1 S 120107 Sphingobium cloacae 0.00 1 0 F 335929 Erythrobacteraceae 0.00 1 0 F1 2800788 Erythrobacter/Porphyrobacter group 0.00 1 0 G 1041 Erythrobacter 0.00 1 1 S 2739433 Erythrobacter mangrovi 0.00 6 0 O 204441 Rhodospirillales 0.00 5 0 F 433 Acetobacteraceae 0.00 3 0 G 50709 Acidocella 0.00 3 0 G1 2648610 unclassified Acidocella 0.00 3 3 S 2697363 Acidocella sp. MX-AZ03 0.00 1 0 G 522 Acidiphilium 0.00 1 1 S 62140 Acidiphilium multivorum 0.00 1 0 G 434 Acetobacter 0.00 1 1 S 431306 Acetobacter ghanensis 0.00 1 0 F 2829815 Azospirillaceae 0.00 1 0 G 191 Azospirillum 0.00 1 1 S 192 Azospirillum brasilense 0.00 2 0 O 204455 Rhodobacterales 0.00 2 0 F 2854170 Roseobacteraceae 0.00 1 0 G 53945 Octadecabacter 0.00 1 0 G1 196158 unclassified Octadecabacter 0.00 1 1 S 2602067 Octadecabacter sp. SW4 0.00 1 0 G 191028 Leisingera 0.00 1 0 S 133924 Leisingera methylohalidivorans 0.00 1 1 S1 999552 Leisingera methylohalidivorans DSM 14336 0.00 2 0 O 204458 Caulobacterales 0.00 2 0 F 76892 Caulobacteraceae 0.00 1 0 G 75 Caulobacter 0.00 1 1 S 1679497 Caulobacter flavus 0.00 1 0 G 76890 Asticcacaulis 0.00 1 1 S 78587 Asticcacaulis excentricus 0.00 14 2 C 1236 Gammaproteobacteria 0.00 5 0 O 72274 Pseudomonadales 0.00 4 0 F 135621 Pseudomonadaceae 0.00 4 2 G 286 Pseudomonas 0.00 2 0 G1 196821 unclassified Pseudomonas 0.00 1 1 S 3058433 Pseudomonas sp. 2,4-D 0.00 1 1 S 2954091 Pseudomonas sp. FP2309 0.00 1 0 F 2887365 Marinobacteraceae 0.00 1 1 G 2742 Marinobacter 0.00 3 0 O 91347 Enterobacterales 0.00 1 1 F 543 Enterobacteriaceae 0.00 1 0 F 1903409 Erwiniaceae 0.00 1 0 G 53335 Pantoea 0.00 1 1 S 470934 Pantoea vagans 0.00 1 0 F 1903414 Morganellaceae 0.00 1 0 G 626 Xenorhabdus 0.00 1 1 S 351672 Xenorhabdus griffiniae 0.00 2 0 O 2887326 Moraxellales 0.00 2 0 F 468 Moraxellaceae 0.00 2 0 G 469 Acinetobacter 0.00 1 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.00 1 1 S 1530123 Acinetobacter seifertii 0.00 1 1 S 756892 Acinetobacter indicus 0.00 1 0 O 118969 Legionellales 0.00 1 0 F 444 Legionellaceae 0.00 1 0 G 445 Legionella 0.00 1 1 S 452 Legionella spiritensis 0.00 1 0 O 135614 Xanthomonadales 0.00 1 0 F 32033 Xanthomonadaceae 0.00 1 0 G 40323 Stenotrophomonas 0.00 1 0 G1 995085 Stenotrophomonas maltophilia group 0.00 1 1 S 40324 Stenotrophomonas maltophilia 0.00 1 0 C 1807140 Acidithiobacillia 0.00 1 0 O 225057 Acidithiobacillales 0.00 1 0 F 225058 Acidithiobacillaceae 0.00 1 1 G 119977 Acidithiobacillus 0.00 4 0 D1 1783270 FCB group 0.00 4 0 D2 68336 Bacteroidota/Chlorobiota group 0.00 4 0 P 976 Bacteroidota 0.00 2 0 C 117743 Flavobacteriia 0.00 2 0 O 200644 Flavobacteriales 0.00 2 0 F 49546 Flavobacteriaceae 0.00 2 0 G 1016 Capnocytophaga 0.00 1 1 S 28188 Capnocytophaga canimorsus 0.00 1 1 S 1848904 Capnocytophaga stomatis 0.00 2 0 C 768503 Cytophagia 0.00 2 0 O 768507 Cytophagales 0.00 2 0 F 1853232 Hymenobacteraceae 0.00 1 0 G 89966 Hymenobacter 0.00 1 0 G1 2615202 unclassified Hymenobacter 0.00 1 1 S 2987689 Hymenobacter sp. YIM 151500-1 0.00 1 0 G 323449 Pontibacter 0.00 1 1 S 2694929 Pontibacter russatus 0.00 1 0 D1 1783257 PVC group 0.00 1 0 P 203682 Planctomycetota 0.00 1 0 C 666505 Phycisphaerae 0.00 1 0 O 666506 Phycisphaerales 0.00 1 0 F 666507 Phycisphaeraceae 0.00 1 0 G 666508 Phycisphaera 0.00 1 0 S 547188 Phycisphaera mikurensis 0.00 1 1 S1 1142394 Phycisphaera mikurensis NBRC 102666 0.00 1 0 P 203691 Spirochaetota 0.00 1 0 C 203692 Spirochaetia 0.00 1 0 O 1643688 Leptospirales 0.00 1 0 F 170 Leptospiraceae 0.00 1 0 G 171 Leptospira 0.00 1 0 G1 2633828 unclassified Leptospira 0.00 1 1 S 2838237 Leptospira sp. severe_002 0.01 37 0 D 2759 Eukaryota 0.01 37 0 D1 33154 Opisthokonta 0.01 37 0 K 33208 Metazoa 0.01 37 0 K1 6072 Eumetazoa 0.01 37 0 K2 33213 Bilateria 0.01 37 0 K3 33511 Deuterostomia 0.01 37 0 P 7711 Chordata 0.01 37 0 P1 89593 Craniata 0.01 37 0 P2 7742 Vertebrata 0.01 37 0 P3 7776 Gnathostomata 0.01 37 0 P4 117570 Teleostomi 0.01 37 0 P5 117571 Euteleostomi 0.01 37 0 P6 8287 Sarcopterygii 0.01 37 0 P7 1338369 Dipnotetrapodomorpha 0.01 37 0 P8 32523 Tetrapoda 0.01 37 0 P9 32524 Amniota 0.01 37 0 C 40674 Mammalia 0.01 37 0 C1 32525 Theria 0.01 37 0 C2 9347 Eutheria 0.01 37 0 C3 1437010 Boreoeutheria 0.01 37 0 C4 314146 Euarchontoglires 0.01 37 0 O 9443 Primates 0.01 37 0 O1 376913 Haplorrhini 0.01 37 0 O2 314293 Simiiformes 0.01 37 0 O3 9526 Catarrhini 0.01 37 0 O4 314295 Hominoidea 0.01 37 0 F 9604 Hominidae 0.01 37 0 F1 207598 Homininae 0.01 37 0 G 9605 Homo 0.01 37 37 S 9606 Homo sapiens 0.00 2 0 D 2157 Archaea 0.00 2 0 P 28890 Euryarchaeota 0.00 2 0 P1 2290931 Stenosarchaea group 0.00 2 0 C 183963 Halobacteria 0.00 2 0 O 2235 Halobacteriales 0.00 2 0 F 1963268 Haloarculaceae 0.00 1 0 G 203135 Halomicrobium 0.00 1 1 S 1586233 Halomicrobium urmianum 0.00 1 0 G 2841540 Halosegnis 0.00 1 0 G1 2864958 unclassified Halosegnis 0.00 1 1 S 3034023 Halosegnis sp. DT85 0.00 2 0 D 10239 Viruses 0.00 2 0 D1 2731341 Duplodnaviria 0.00 2 0 K 2731360 Heunggongvirae 0.00 2 0 P 2731618 Uroviricota 0.00 2 0 C 2731619 Caudoviricetes 0.00 1 1 G 2843397 Junavirus 0.00 1 0 G 2843413 Larmunavirus 0.00 1 0 S 2845138 Larmunavirus Lrm1 0.00 1 1 S1 496874 Lactobacillus phage Lrm1