Read summary
Samples summary
Lineages
Sunburst
This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.
Taxonomy
Barplot of the 9 most abundant taxa at the phylum rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.
Barplot of the 9 most abundant taxa at the class rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.
Barplot of the 9 most abundant taxa at the order rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.
Barplot of the 9 most abundant taxa at the family rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.
Barplot of the 9 most abundant taxa at the genus rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.
Barplot of the 9 most abundant taxa at the species rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.
Abundances
Abundance table for the phylum rank.
Only taxa whose global abundance are above the
abundance_threshold parameter will appear in the table.
| phylum | bc04 | total | superkingdom | kingdom | tax |
|---|---|---|---|---|---|
| Euryarchaeota | 1 | 1 | Archaea | Archaea_none | Archaea;Archaea_none;Euryarchaeota |
| Actinomycetota | 210640 | 210640 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Actinomycetota |
| Bacillota | 79103 | 79103 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Bacillota |
| Bacteroidota | 4 | 4 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Bacteroidota |
| Cyanobacteriota | 4 | 4 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Cyanobacteriota |
| Planctomycetota | 1 | 1 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Planctomycetota |
| Pseudomonadota | 239 | 239 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Pseudomonadota |
| Spirochaetota | 1 | 1 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Spirochaetota |
| Chordata | 37 | 37 | Eukaryota | Metazoa | Eukaryota;Metazoa;Chordata |
| Unknown | 7803 | 7803 | Unclassified | Unknown | Unclassified;Unknown;Unknown |
| Uroviricota | 1 | 1 | Viruses | Heunggongvirae | Viruses;Heunggongvirae;Uroviricota |
Abundance table for the class rank.
Only taxa whose global abundance are above the
abundance_threshold parameter will appear in the table.
| class | bc04 | total | superkingdom | kingdom | phylum | tax |
|---|---|---|---|---|---|---|
| Halobacteria | 1 | 1 | Archaea | Archaea_none | Euryarchaeota | Archaea;Archaea_none;Euryarchaeota;Halobacteria |
| Actinomycetes | 210640 | 210640 | Bacteria | Bacteria_none | Actinomycetota | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes |
| Bacilli | 79101 | 79101 | Bacteria | Bacteria_none | Bacillota | Bacteria;Bacteria_none;Bacillota;Bacilli |
| Clostridia | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacteria;Bacteria_none;Bacillota;Clostridia |
| Cytophagia | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Bacteria;Bacteria_none;Bacteroidota;Cytophagia |
| Flavobacteriia | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia |
| Cyanophyceae | 4 | 4 | Bacteria | Bacteria_none | Cyanobacteriota | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae |
| Phycisphaerae | 1 | 1 | Bacteria | Bacteria_none | Planctomycetota | Bacteria;Bacteria_none;Planctomycetota;Phycisphaerae |
| Alphaproteobacteria | 117 | 117 | Bacteria | Bacteria_none | Pseudomonadota | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria |
| Betaproteobacteria | 116 | 116 | Bacteria | Bacteria_none | Pseudomonadota | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria |
| Gammaproteobacteria | 6 | 6 | Bacteria | Bacteria_none | Pseudomonadota | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria |
| Spirochaetia | 1 | 1 | Bacteria | Bacteria_none | Spirochaetota | Bacteria;Bacteria_none;Spirochaetota;Spirochaetia |
| Mammalia | 37 | 37 | Eukaryota | Metazoa | Chordata | Eukaryota;Metazoa;Chordata;Mammalia |
| Unknown | 7803 | 7803 | Unclassified | Unknown | Unknown | Unclassified;Unknown;Unknown;Unknown |
| Caudoviricetes | 1 | 1 | Viruses | Heunggongvirae | Uroviricota | Viruses;Heunggongvirae;Uroviricota;Caudoviricetes |
Abundance table for the order rank.
Only taxa whose global abundance are above the
abundance_threshold parameter will appear in the table.
| order | bc04 | total | superkingdom | kingdom | phylum | class | tax |
|---|---|---|---|---|---|---|---|
| Halobacteriales | 1 | 1 | Archaea | Archaea_none | Euryarchaeota | Halobacteria | Archaea;Archaea_none;Euryarchaeota;Halobacteria;Halobacteriales |
| Actinomycetales | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Actinomycetales |
| Bifidobacteriales | 210579 | 210579 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales |
| Kitasatosporales | 7 | 7 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales |
| Micrococcales | 15 | 15 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales |
| Micromonosporales | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales |
| Mycobacteriales | 25 | 25 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales |
| Propionibacteriales | 7 | 7 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales |
| Pseudonocardiales | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales |
| Bacillales | 9 | 9 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales |
| Lactobacillales | 79092 | 79092 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales |
| Eubacteriales | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Clostridia | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales |
| Cytophagales | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales |
| Flavobacteriales | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Flavobacteriia | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales |
| Nostocales | 3 | 3 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Nostocales |
| Pseudanabaenales | 1 | 1 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Pseudanabaenales |
| Phycisphaerales | 1 | 1 | Bacteria | Bacteria_none | Planctomycetota | Phycisphaerae | Bacteria;Bacteria_none;Planctomycetota;Phycisphaerae;Phycisphaerales |
| Caulobacterales | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales |
| Hyphomicrobiales | 84 | 84 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales |
| Rhodobacterales | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales |
| Rhodospirillales | 6 | 6 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales |
| Sphingomonadales | 23 | 23 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales |
| Burkholderiales | 115 | 115 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales |
| Nitrosomonadales | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Nitrosomonadales |
| Enterobacterales | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales |
| Legionellales | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Legionellales |
| Moraxellales | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Moraxellales |
| Xanthomonadales | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Xanthomonadales |
| Leptospirales | 1 | 1 | Bacteria | Bacteria_none | Spirochaetota | Spirochaetia | Bacteria;Bacteria_none;Spirochaetota;Spirochaetia;Leptospirales |
| Primates | 37 | 37 | Eukaryota | Metazoa | Chordata | Mammalia | Eukaryota;Metazoa;Chordata;Mammalia;Primates |
| Unknown | 7803 | 7803 | Unclassified | Unknown | Unknown | Unknown | Unclassified;Unknown;Unknown;Unknown;Unknown |
| Caudoviricetes_Incertae_sedis | 1 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Viruses;Heunggongvirae;Uroviricota;Caudoviricetes;Caudoviricetes_Incertae_sedis |
Abundance table for the family rank.
Only taxa whose global abundance are above the
abundance_threshold parameter will appear in the table.
| family | bc04 | total | superkingdom | kingdom | phylum | class | order | tax |
|---|---|---|---|---|---|---|---|---|
| Haloarculaceae | 1 | 1 | Archaea | Archaea_none | Euryarchaeota | Halobacteria | Halobacteriales | Archaea;Archaea_none;Euryarchaeota;Halobacteria;Halobacteriales;Haloarculaceae |
| Actinomycetaceae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Actinomycetales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Actinomycetales;Actinomycetaceae |
| Bifidobacteriaceae | 210579 | 210579 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae |
| Streptomycetaceae | 7 | 7 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae |
| Dermabacteraceae | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Dermabacteraceae |
| Intrasporangiaceae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Intrasporangiaceae |
| Microbacteriaceae | 9 | 9 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae |
| Micrococcaceae | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae |
| Micromonosporaceae | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micromonosporales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales;Micromonosporaceae |
| Corynebacteriaceae | 6 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae |
| Mycobacteriaceae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Mycobacteriaceae |
| Nocardiaceae | 18 | 18 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Nocardiaceae |
| Nocardioidaceae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Nocardioidaceae |
| Propionibacteriaceae | 6 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Propionibacteriaceae |
| Pseudonocardiaceae | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae |
| Bacillaceae | 9 | 9 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae |
| Carnobacteriaceae | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae |
| Lactobacillaceae | 70638 | 70638 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae |
| Streptococcaceae | 8453 | 8453 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae |
| Clostridiaceae | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae |
| Peptostreptococcaceae | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptostreptococcaceae |
| Hymenobacteraceae | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Cytophagales | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales;Hymenobacteraceae |
| Flavobacteriaceae | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Flavobacteriia | Flavobacteriales | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae |
| Nostocaceae | 3 | 3 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Nostocales | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Nostocales;Nostocaceae |
| Thermosynechococcaceae | 1 | 1 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Pseudanabaenales | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Pseudanabaenales;Thermosynechococcaceae |
| Phycisphaeraceae | 1 | 1 | Bacteria | Bacteria_none | Planctomycetota | Phycisphaerae | Phycisphaerales | Bacteria;Bacteria_none;Planctomycetota;Phycisphaerae;Phycisphaerales;Phycisphaeraceae |
| Caulobacteraceae | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales;Caulobacteraceae |
| Boseaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Boseaceae |
| Nitrobacteraceae | 57 | 57 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae |
| Phyllobacteriaceae | 25 | 25 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Phyllobacteriaceae |
| Rhizobiaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Rhizobiaceae |
| Roseobacteraceae | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Roseobacteraceae |
| Acetobacteraceae | 5 | 5 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae |
| Azospirillaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Azospirillaceae |
| Erythrobacteraceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae |
| Sphingomonadaceae | 22 | 22 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae |
| Alcaligenaceae | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Alcaligenaceae |
| Burkholderiaceae | 81 | 81 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae |
| Burkholderiales_Incertae_sedis | 8 | 8 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis |
| Comamonadaceae | 19 | 19 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae |
| Oxalobacteraceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Oxalobacteraceae |
| Sphaerotilaceae | 4 | 4 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae |
| Sterolibacteriaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Nitrosomonadales;Sterolibacteriaceae |
| Erwiniaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae |
| Morganellaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Morganellaceae |
| Legionellaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Legionellales | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Legionellales;Legionellaceae |
| Moraxellaceae | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Moraxellales | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Moraxellales;Moraxellaceae |
| Xanthomonadaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Xanthomonadales | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae |
| Leptospiraceae | 1 | 1 | Bacteria | Bacteria_none | Spirochaetota | Spirochaetia | Leptospirales | Bacteria;Bacteria_none;Spirochaetota;Spirochaetia;Leptospirales;Leptospiraceae |
| Hominidae | 37 | 37 | Eukaryota | Metazoa | Chordata | Mammalia | Primates | Eukaryota;Metazoa;Chordata;Mammalia;Primates;Hominidae |
| Unknown | 7803 | 7803 | Unclassified | Unknown | Unknown | Unknown | Unknown | Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown |
| Caudoviricetes_Incertae_sedis_Incertae_sedis | 1 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes_Incertae_sedis | Viruses;Heunggongvirae;Uroviricota;Caudoviricetes;Caudoviricetes_Incertae_sedis;Caudoviricetes_Incertae_sedis_Incertae_sedis |
Abundance table for the genus rank.
Only taxa whose global abundance are above the
abundance_threshold parameter will appear in the table.
| genus | bc04 | total | superkingdom | kingdom | phylum | class | order | family | tax |
|---|---|---|---|---|---|---|---|---|---|
| Halosiccatus | 1 | 1 | Archaea | Archaea_none | Euryarchaeota | Halobacteria | Halobacteriales | Haloarculaceae | Archaea;Archaea_none;Euryarchaeota;Halobacteria;Halobacteriales;Haloarculaceae;Halosiccatus |
| Arcanobacterium | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Actinomycetales;Actinomycetaceae;Arcanobacterium |
| Bifidobacterium | 210576 | 210576 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium |
| Gardnerella | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Gardnerella |
| Kitasatospora | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Kitasatospora |
| Peterkaempfera | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Peterkaempfera |
| Streptomyces | 5 | 5 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces |
| Brachybacterium | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Dermabacteraceae;Brachybacterium |
| Janibacter | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Intrasporangiaceae;Janibacter |
| Frondihabitans | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Frondihabitans |
| Herbiconiux | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Herbiconiux |
| Homoserinibacter | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Homoserinibacter |
| Microbacterium | 6 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium |
| Arthrobacter | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Arthrobacter |
| Rothia | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Rothia |
| Actinoplanes | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales;Micromonosporaceae;Actinoplanes |
| Micromonospora | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales;Micromonosporaceae;Micromonospora |
| Corynebacterium | 6 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium |
| Mycobacterium | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Mycobacteriaceae;Mycobacterium |
| Rhodococcus | 18 | 18 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Nocardiaceae;Rhodococcus |
| Nocardioides | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Nocardioidaceae;Nocardioides |
| Cutibacterium | 6 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Propionibacteriaceae;Cutibacterium |
| Actinokineospora | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Actinokineospora |
| Amycolatopsis | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Amycolatopsis |
| Bacillus | 7 | 7 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Bacillus |
| Evansella | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Evansella |
| Weizmannia | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Weizmannia |
| Desemzia | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Desemzia |
| Fructilactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Fructilactobacillus |
| Lacticaseibacillus | 69903 | 69903 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus |
| Lactiplantibacillus | 334 | 334 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus |
| Lactobacillus | 244 | 244 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus |
| Latilactobacillus | 5 | 5 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus |
| Lentilactobacillus | 13 | 13 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus |
| Leuconostoc | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc |
| Levilactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus |
| Ligilactobacillus | 125 | 125 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus |
| Limosilactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus |
| Liquorilactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus |
| Loigolactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Loigolactobacillus |
| Pediococcus | 5 | 5 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus |
| Secundilactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus |
| Weissella | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Weissella |
| Lactococcus | 33 | 33 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus |
| Streptococcus | 8420 | 8420 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus |
| Clostridium | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium |
| Clostridioides | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Peptostreptococcaceae | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptostreptococcaceae;Clostridioides |
| Hymenobacter | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales;Hymenobacteraceae;Hymenobacter |
| Pontibacter | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales;Hymenobacteraceae;Pontibacter |
| Capnocytophaga | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga |
| Nostoc | 3 | 3 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Nostocales;Nostocaceae;Nostoc |
| Thermosynechococcus | 1 | 1 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Pseudanabaenales | Thermosynechococcaceae | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Pseudanabaenales;Thermosynechococcaceae;Thermosynechococcus |
| Phycisphaera | 1 | 1 | Bacteria | Bacteria_none | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Bacteria;Bacteria_none;Planctomycetota;Phycisphaerae;Phycisphaerales;Phycisphaeraceae;Phycisphaera |
| Asticcacaulis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Asticcacaulis |
| Caulobacter | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Caulobacter |
| Bosea | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Boseaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Boseaceae;Bosea |
| Afipia | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Afipia |
| Bradyrhizobium | 49 | 49 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium |
| Rhodopseudomonas | 5 | 5 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Rhodopseudomonas |
| Mesorhizobium | 25 | 25 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Phyllobacteriaceae;Mesorhizobium |
| Rhizobium | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Rhizobiaceae;Rhizobium |
| Leisingera | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Roseobacteraceae;Leisingera |
| Octadecabacter | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Roseobacteraceae;Octadecabacter |
| Acetobacter | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter |
| Acidiphilium | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acidiphilium |
| Acidocella | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acidocella |
| Azospirillum | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Azospirillaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Azospirillaceae;Azospirillum |
| Erythrobacter | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Erythrobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter |
| Sphingobium | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium |
| Sphingomonas | 21 | 21 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas |
| Achromobacter | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Achromobacter |
| Pigmentiphaga | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Pigmentiphaga |
| Burkholderia | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia |
| Cupriavidus | 70 | 70 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus |
| Paraburkholderia | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Paraburkholderia |
| Ralstonia | 7 | 7 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia |
| Aquabacterium | 5 | 5 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Aquabacterium |
| Paucibacter | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Paucibacter |
| Xylophilus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Xylophilus |
| Acidovorax | 9 | 9 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax |
| Comamonas | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas |
| Hydrogenophaga | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Hydrogenophaga |
| Kinneretia | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Kinneretia |
| Variovorax | 4 | 4 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Variovorax |
| Herbaspirillum | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Herbaspirillum |
| Aquincola | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Aquincola |
| Caldimonas | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Caldimonas |
| Methylibium | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Methylibium |
| Rubrivivax | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Rubrivivax |
| Methyloversatilis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Sterolibacteriaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Nitrosomonadales;Sterolibacteriaceae;Methyloversatilis |
| Pantoea | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Pantoea |
| Xenorhabdus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Morganellaceae | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Morganellaceae;Xenorhabdus |
| Legionella | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Legionellales | Legionellaceae | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Legionellales;Legionellaceae;Legionella |
| Acinetobacter | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Moraxellales;Moraxellaceae;Acinetobacter |
| Stenotrophomonas | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas |
| Leptospira | 1 | 1 | Bacteria | Bacteria_none | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Bacteria;Bacteria_none;Spirochaetota;Spirochaetia;Leptospirales;Leptospiraceae;Leptospira |
| Homo | 37 | 37 | Eukaryota | Metazoa | Chordata | Mammalia | Primates | Hominidae | Eukaryota;Metazoa;Chordata;Mammalia;Primates;Hominidae;Homo |
| Unknown | 7803 | 7803 | Unclassified | Unknown | Unknown | Unknown | Unknown | Unknown | Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown |
| Larmunavirus | 1 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes_Incertae_sedis | Caudoviricetes_Incertae_sedis_Incertae_sedis | Viruses;Heunggongvirae;Uroviricota;Caudoviricetes;Caudoviricetes_Incertae_sedis;Caudoviricetes_Incertae_sedis_Incertae_sedis;Larmunavirus |
Abundance table for the species rank.
Only taxa whose global abundance are above the
abundance_threshold parameter will appear in the table.
| species | bc04 | total | superkingdom | kingdom | phylum | class | order | family | genus | tax |
|---|---|---|---|---|---|---|---|---|---|---|
| Halosiccatus urmianus | 1 | 1 | Archaea | Archaea_none | Euryarchaeota | Halobacteria | Halobacteriales | Haloarculaceae | Halosiccatus | Archaea;Archaea_none;Euryarchaeota;Halobacteria;Halobacteriales;Haloarculaceae;Halosiccatus;Halosiccatus urmianus |
| Arcanobacterium haemolyticum | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Arcanobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Actinomycetales;Actinomycetaceae;Arcanobacterium;Arcanobacterium haemolyticum |
| Bifidobacterium actinocoloniiforme | 12 | 12 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium actinocoloniiforme |
| Bifidobacterium adolescentis | 30 | 30 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium adolescentis |
| Bifidobacterium angulatum | 27 | 27 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium angulatum |
| Bifidobacterium animalis | 225 | 225 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium animalis |
| Bifidobacterium asteroides | 17 | 17 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium asteroides |
| Bifidobacterium bifidum | 207756 | 207756 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium bifidum |
| Bifidobacterium breve | 84 | 84 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium breve |
| Bifidobacterium catenulatum | 14 | 14 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium catenulatum |
| Bifidobacterium choerinum | 11 | 11 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium choerinum |
| Bifidobacterium coryneforme | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium coryneforme |
| Bifidobacterium dentium | 23 | 23 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium dentium |
| Bifidobacterium eulemuris | 13 | 13 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium eulemuris |
| Bifidobacterium imperatoris | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium imperatoris |
| Bifidobacterium lemurum | 17 | 17 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium lemurum |
| Bifidobacterium longum | 350 | 350 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium longum |
| Bifidobacterium pseudocatenulatum | 26 | 26 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium pseudocatenulatum |
| Bifidobacterium pseudolongum | 20 | 20 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium pseudolongum |
| Bifidobacterium pullorum | 31 | 31 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium pullorum |
| Bifidobacterium saguini | 4 | 4 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium saguini |
| Bifidobacterium scardovii | 74 | 74 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium scardovii |
| Bifidobacterium sp. SKU | 1429 | 1429 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium sp. SKU |
| Bifidobacterium sp. TKU | 372 | 372 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium sp. TKU |
| Bifidobacterium subtile | 18 | 18 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium subtile |
| Bifidobacterium thermophilum | 19 | 19 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium thermophilum |
| Gardnerella swidsinskii | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Gardnerella | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Gardnerella;Gardnerella swidsinskii |
| Gardnerella vaginalis | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Gardnerella | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Gardnerella;Gardnerella vaginalis |
| Kitasatospora setae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Kitasatospora | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Kitasatospora;Kitasatospora setae |
| Peterkaempfera bronchialis | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Peterkaempfera | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Peterkaempfera;Peterkaempfera bronchialis |
| Streptomyces avermitilis | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces;Streptomyces avermitilis |
| Streptomyces goshikiensis | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces;Streptomyces goshikiensis |
| Streptomyces noursei | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces;Streptomyces noursei |
| Streptomyces sp. HM190 | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces;Streptomyces sp. HM190 |
| Brachybacterium faecium | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Brachybacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Dermabacteraceae;Brachybacterium;Brachybacterium faecium |
| Janibacter limosus | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Janibacter | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Intrasporangiaceae;Janibacter;Janibacter limosus |
| Frondihabitans sucicola | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Frondihabitans | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Frondihabitans;Frondihabitans sucicola |
| Herbiconiux sp. SALV-R1 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Herbiconiux | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Herbiconiux;Herbiconiux sp. SALV-R1 |
| Homoserinibacter sp. YIM 151385 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Homoserinibacter | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Homoserinibacter;Homoserinibacter sp. YIM 151385 |
| Microbacterium sp. BH-3-3-3 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium sp. BH-3-3-3 |
| Microbacterium sp. Clip185 | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium sp. Clip185 |
| Microbacterium sp. RG1 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium sp. RG1 |
| Microbacterium sp. YJN-G | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium sp. YJN-G |
| Microbacterium sp. cx-55 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium sp. cx-55 |
| Arthrobacter koreensis | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Arthrobacter;Arthrobacter koreensis |
| Rothia kristinae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Rothia;Rothia kristinae |
| Actinoplanes missouriensis | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Actinoplanes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales;Micromonosporaceae;Actinoplanes;Actinoplanes missouriensis |
| Micromonospora sp. WMMD812 | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonospora | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales;Micromonosporaceae;Micromonospora;Micromonospora sp. WMMD812 |
| Corynebacterium caspium | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium;Corynebacterium caspium |
| Corynebacterium hansenii | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium;Corynebacterium hansenii |
| Corynebacterium jeikeium | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium;Corynebacterium jeikeium |
| Mycobacterium malmoense | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Mycobacteriaceae;Mycobacterium;Mycobacterium malmoense |
| Rhodococcus fascians | 18 | 18 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Nocardiaceae;Rhodococcus;Rhodococcus fascians |
| Nocardioides sp. InS609-2 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Nocardioidaceae;Nocardioides;Nocardioides sp. InS609-2 |
| Cutibacterium acnes | 6 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Propionibacteriaceae;Cutibacterium;Cutibacterium acnes |
| Actinokineospora sp. UTMC 2448 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Actinokineospora | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Actinokineospora;Actinokineospora sp. UTMC 2448 |
| Amycolatopsis methanolica | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Amycolatopsis;Amycolatopsis methanolica |
| Amycolatopsis sp. YIM 10 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Amycolatopsis;Amycolatopsis sp. YIM 10 |
| Bacillus cereus | 5 | 5 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Bacillus;Bacillus cereus |
| Bacillus smithii | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Bacillus;Bacillus smithii |
| Bacillus thuringiensis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Bacillus;Bacillus thuringiensis |
| Evansella sp. LMS18 | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Evansella | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Evansella;Evansella sp. LMS18 |
| Weizmannia coagulans | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Weizmannia | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Weizmannia;Weizmannia coagulans |
| Desemzia incerta | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Desemzia | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Desemzia;Desemzia incerta |
| Fructilactobacillus lindneri | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Fructilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Fructilactobacillus;Fructilactobacillus lindneri |
| Lacticaseibacillus casei | 16 | 16 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus casei |
| Lacticaseibacillus chiayiensis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus chiayiensis |
| Lacticaseibacillus manihotivorans | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus manihotivorans |
| Lacticaseibacillus paracasei | 221 | 221 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus paracasei |
| Lacticaseibacillus rhamnosus | 69664 | 69664 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus rhamnosus |
| Lactiplantibacillus argentoratensis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus argentoratensis |
| Lactiplantibacillus paraplantarum | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus paraplantarum |
| Lactiplantibacillus pentosus | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus pentosus |
| Lactiplantibacillus plantarum | 330 | 330 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus plantarum |
| Lactobacillus acetotolerans | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus acetotolerans |
| Lactobacillus acidophilus | 192 | 192 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus acidophilus |
| Lactobacillus amylovorus | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus amylovorus |
| Lactobacillus delbrueckii | 8 | 8 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus delbrueckii |
| Lactobacillus helveticus | 39 | 39 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus helveticus |
| Lactobacillus iners | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus iners |
| Lactobacillus kefiranofaciens | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus kefiranofaciens |
| Latilactobacillus curvatus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Latilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus;Latilactobacillus curvatus |
| Latilactobacillus sakei | 4 | 4 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Latilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus;Latilactobacillus sakei |
| Lentilactobacillus buchneri | 13 | 13 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lentilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus buchneri |
| Leuconostoc garlicum | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc;Leuconostoc garlicum |
| Levilactobacillus brevis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Levilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus;Levilactobacillus brevis |
| Ligilactobacillus salivarius | 125 | 125 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Ligilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus salivarius |
| Limosilactobacillus fermentum | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Limosilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus fermentum |
| Liquorilactobacillus nagelii | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Liquorilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus;Liquorilactobacillus nagelii |
| Loigolactobacillus coryniformis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Loigolactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Loigolactobacillus;Loigolactobacillus coryniformis |
| Pediococcus acidilactici | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus acidilactici |
| Pediococcus claussenii | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus claussenii |
| Pediococcus pentosaceus | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus pentosaceus |
| Secundilactobacillus paracollinoides | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Secundilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus;Secundilactobacillus paracollinoides |
| Weissella paramesenteroides | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella paramesenteroides |
| Lactococcus cremoris | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus cremoris |
| Lactococcus lactis | 32 | 32 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus lactis |
| Streptococcus agalactiae | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus agalactiae |
| Streptococcus chenjunshii | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus chenjunshii |
| Streptococcus equi | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus equi |
| Streptococcus equinus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus equinus |
| Streptococcus gallolyticus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus gallolyticus |
| Streptococcus iniae | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus iniae |
| Streptococcus mitis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus mitis |
| Streptococcus pneumoniae | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus pneumoniae |
| Streptococcus pyogenes | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus pyogenes |
| Streptococcus salivarius | 3 | 3 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus salivarius |
| Streptococcus sanguinis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus sanguinis |
| Streptococcus sobrinus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus sobrinus |
| Streptococcus sp. zg-86 | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus sp. zg-86 |
| Streptococcus suis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus suis |
| Streptococcus thermophilus | 8401 | 8401 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus thermophilus |
| Streptococcus vestibularis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus vestibularis |
| Clostridium sporogenes | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium sporogenes |
| Clostridioides difficile | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Peptostreptococcaceae | Clostridioides | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptostreptococcaceae;Clostridioides;Clostridioides difficile |
| Hymenobacter sp. YIM 151500-1 | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales;Hymenobacteraceae;Hymenobacter;Hymenobacter sp. YIM 151500-1 |
| Pontibacter russatus | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Pontibacter | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales;Hymenobacteraceae;Pontibacter;Pontibacter russatus |
| Capnocytophaga canimorsus | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Capnocytophaga | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga;Capnocytophaga canimorsus |
| Capnocytophaga stomatis | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Capnocytophaga | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga;Capnocytophaga stomatis |
| Nostoc sp. C057 | 3 | 3 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Nostocales;Nostocaceae;Nostoc;Nostoc sp. C057 |
| Thermosynechococcus vestitus | 1 | 1 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Pseudanabaenales | Thermosynechococcaceae | Thermosynechococcus | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Pseudanabaenales;Thermosynechococcaceae;Thermosynechococcus;Thermosynechococcus vestitus |
| Phycisphaera mikurensis | 1 | 1 | Bacteria | Bacteria_none | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaera | Bacteria;Bacteria_none;Planctomycetota;Phycisphaerae;Phycisphaerales;Phycisphaeraceae;Phycisphaera;Phycisphaera mikurensis |
| Asticcacaulis excentricus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Asticcacaulis | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Asticcacaulis;Asticcacaulis excentricus |
| Caulobacter flavus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Caulobacter | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Caulobacter;Caulobacter flavus |
| Bosea vaviloviae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Boseaceae | Bosea | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Boseaceae;Bosea;Bosea vaviloviae |
| Afipia carboxidovorans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Afipia | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Afipia;Afipia carboxidovorans |
| Afipia sp. NBIMC_P1-C1 | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Afipia | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Afipia;Afipia sp. NBIMC_P1-C1 |
| Bradyrhizobium australafricanum | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium australafricanum |
| Bradyrhizobium betae | 9 | 9 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium betae |
| Bradyrhizobium erythrophlei | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium erythrophlei |
| Bradyrhizobium genosp. B | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium genosp. B |
| Bradyrhizobium genosp. L | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium genosp. L |
| Bradyrhizobium guangdongense | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium guangdongense |
| Bradyrhizobium japonicum | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium japonicum |
| Bradyrhizobium lablabi | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium lablabi |
| Bradyrhizobium sediminis | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sediminis |
| Bradyrhizobium sp. 1(2017) | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. 1(2017) |
| Bradyrhizobium sp. 41S5 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. 41S5 |
| Bradyrhizobium sp. 6(2017) | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. 6(2017) |
| Bradyrhizobium sp. A19 | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. A19 |
| Bradyrhizobium sp. C-145 | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. C-145 |
| Bradyrhizobium sp. CB1024 | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. CB1024 |
| Bradyrhizobium sp. CCBAU 051011 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. CCBAU 051011 |
| Bradyrhizobium sp. CCBAU 51765 | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. CCBAU 51765 |
| Bradyrhizobium sp. CCBAU 53421 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. CCBAU 53421 |
| Bradyrhizobium sp. ORS 285 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. ORS 285 |
| Bradyrhizobium sp. SK17 | 10 | 10 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. SK17 |
| Rhodopseudomonas palustris | 5 | 5 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Rhodopseudomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Rhodopseudomonas;Rhodopseudomonas palustris |
| Mesorhizobium terrae | 25 | 25 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Mesorhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Phyllobacteriaceae;Mesorhizobium;Mesorhizobium terrae |
| Rhizobium sp. AB2/73 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Rhizobiaceae;Rhizobium;Rhizobium sp. AB2/73 |
| Leisingera methylohalidivorans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Leisingera | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Roseobacteraceae;Leisingera;Leisingera methylohalidivorans |
| Octadecabacter sp. SW4 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Octadecabacter | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Roseobacteraceae;Octadecabacter;Octadecabacter sp. SW4 |
| Acetobacter ghanensis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Acetobacter | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter;Acetobacter ghanensis |
| Acidiphilium multivorum | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Acidiphilium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acidiphilium;Acidiphilium multivorum |
| Acidocella sp. MX-AZ03 | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Acidocella | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acidocella;Acidocella sp. MX-AZ03 |
| Azospirillum brasilense | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Azospirillaceae | Azospirillum | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Azospirillaceae;Azospirillum;Azospirillum brasilense |
| Erythrobacter mangrovi | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Erythrobacteraceae | Erythrobacter | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter;Erythrobacter mangrovi |
| Sphingobium cloacae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium;Sphingobium cloacae |
| Sphingomonas alpina | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas alpina |
| Sphingomonas sanxanigenens | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sanxanigenens |
| Sphingomonas sp. FARSPH | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. FARSPH |
| Sphingomonas sp. LM7 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. LM7 |
| Sphingomonas sp. NIBR 02145 | 14 | 14 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. NIBR 02145 |
| Sphingomonas sp. QA11 | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. QA11 |
| Sphingomonas sp. R1 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. R1 |
| Achromobacter xylosoxidans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Achromobacter | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Achromobacter;Achromobacter xylosoxidans |
| Pigmentiphaga sp. H8 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Pigmentiphaga | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Pigmentiphaga;Pigmentiphaga sp. H8 |
| Burkholderia ambifaria | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia;Burkholderia ambifaria |
| Burkholderia contaminans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia;Burkholderia contaminans |
| Burkholderia pyrrocinia | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia;Burkholderia pyrrocinia |
| Cupriavidus basilensis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus basilensis |
| Cupriavidus campinensis | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus campinensis |
| Cupriavidus metallidurans | 24 | 24 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus metallidurans |
| Cupriavidus nantongensis | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus nantongensis |
| Cupriavidus necator | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus necator |
| Cupriavidus pauculus | 15 | 15 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus pauculus |
| Cupriavidus pinatubonensis | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus pinatubonensis |
| Cupriavidus sp. EM10 | 15 | 15 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus sp. EM10 |
| Cupriavidus sp. P-10 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus sp. P-10 |
| Cupriavidus sp. U2 | 4 | 4 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus sp. U2 |
| Paraburkholderia fungorum | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Paraburkholderia;Paraburkholderia fungorum |
| Ralstonia insidiosa | 6 | 6 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia;Ralstonia insidiosa |
| Ralstonia pseudosolanacearum | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia;Ralstonia pseudosolanacearum |
| Aquabacterium olei | 5 | 5 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Aquabacterium | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Aquabacterium;Aquabacterium olei |
| Paucibacter aquatile | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Paucibacter | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Paucibacter;Paucibacter aquatile |
| Paucibacter sp. KCTC 42545 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Paucibacter | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Paucibacter;Paucibacter sp. KCTC 42545 |
| Xylophilus rhododendri | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Xylophilus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Xylophilus;Xylophilus rhododendri |
| Acidovorax antarcticus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax;Acidovorax antarcticus |
| Acidovorax avenae | 6 | 6 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax;Acidovorax avenae |
| Acidovorax carolinensis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax;Acidovorax carolinensis |
| Acidovorax sp. GBBC 1281 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax;Acidovorax sp. GBBC 1281 |
| Comamonas serinivorans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas;Comamonas serinivorans |
| Comamonas sp. NLF-1-9 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas;Comamonas sp. NLF-1-9 |
| Comamonas sp. NLF-7-7 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas;Comamonas sp. NLF-7-7 |
| Hydrogenophaga sp. SL48 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hydrogenophaga | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Hydrogenophaga;Hydrogenophaga sp. SL48 |
| Kinneretia sp. DAIF2 | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Kinneretia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Kinneretia;Kinneretia sp. DAIF2 |
| Variovorax sp. PAMC28562 | 4 | 4 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Variovorax;Variovorax sp. PAMC28562 |
| Herbaspirillum robiniae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Herbaspirillum;Herbaspirillum robiniae |
| Aquincola tertiaricarbonis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Aquincola | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Aquincola;Aquincola tertiaricarbonis |
| Caldimonas brevitalea | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Caldimonas | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Caldimonas;Caldimonas brevitalea |
| Methylibium sp. Pch-M | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Methylibium | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Methylibium;Methylibium sp. Pch-M |
| Rubrivivax gelatinosus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Rubrivivax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Rubrivivax;Rubrivivax gelatinosus |
| Methyloversatilis sp. RAC08 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Sterolibacteriaceae | Methyloversatilis | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Nitrosomonadales;Sterolibacteriaceae;Methyloversatilis;Methyloversatilis sp. RAC08 |
| Pantoea vagans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Pantoea | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Pantoea;Pantoea vagans |
| Xenorhabdus griffiniae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Morganellaceae | Xenorhabdus | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Morganellaceae;Xenorhabdus;Xenorhabdus griffiniae |
| Legionella spiritensis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Legionellales | Legionellaceae | Legionella | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Legionellales;Legionellaceae;Legionella;Legionella spiritensis |
| Acinetobacter indicus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Moraxellales;Moraxellaceae;Acinetobacter;Acinetobacter indicus |
| Acinetobacter seifertii | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Moraxellales;Moraxellaceae;Acinetobacter;Acinetobacter seifertii |
| Stenotrophomonas maltophilia | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Stenotrophomonas | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas;Stenotrophomonas maltophilia |
| Leptospira sp. severe_002 | 1 | 1 | Bacteria | Bacteria_none | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Bacteria;Bacteria_none;Spirochaetota;Spirochaetia;Leptospirales;Leptospiraceae;Leptospira;Leptospira sp. severe_002 |
| Homo sapiens | 37 | 37 | Eukaryota | Metazoa | Chordata | Mammalia | Primates | Hominidae | Homo | Eukaryota;Metazoa;Chordata;Mammalia;Primates;Hominidae;Homo;Homo sapiens |
| Unknown | 7803 | 7803 | Unclassified | Unknown | Unknown | Unknown | Unknown | Unknown | Unknown | Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown |
| Larmunavirus Lrm1 | 1 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes_Incertae_sedis | Caudoviricetes_Incertae_sedis_Incertae_sedis | Larmunavirus | Viruses;Heunggongvirae;Uroviricota;Caudoviricetes;Caudoviricetes_Incertae_sedis;Caudoviricetes_Incertae_sedis_Incertae_sedis;Larmunavirus;Larmunavirus Lrm1 |
Rarefied abundance table for the phylum rank.
All samples have been randomly subsetted to have the same number of reads.
| phylum | bc04 | total | superkingdom | kingdom | tax |
|---|---|---|---|---|---|
| Euryarchaeota | 1 | 1 | Archaea | Archaea_none | Archaea;Archaea_none;Euryarchaeota |
| Actinomycetota | 200137 | 200050 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Actinomycetota |
| Bacillota | 75125 | 75211 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Bacillota |
| Bacteroidota | 4 | 4 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Bacteroidota |
| Cyanobacteriota | 4 | 4 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Cyanobacteriota |
| Planctomycetota | 1 | 1 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Planctomycetota |
| Pseudomonadota | 220 | 230 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Pseudomonadota |
| Spirochaetota | 1 | 1 | Bacteria | Bacteria_none | Bacteria;Bacteria_none;Spirochaetota |
| Chordata | 36 | 34 | Eukaryota | Metazoa | Eukaryota;Metazoa;Chordata |
| Unknown | 7412 | 7405 | Unclassified | Unknown | Unclassified;Unknown;Unknown |
| Uroviricota | 1 | 1 | Viruses | Heunggongvirae | Viruses;Heunggongvirae;Uroviricota |
Rarefied abundance table for the class rank.
All samples have been randomly subsetted to have the same number of reads.
| class | bc04 | total | superkingdom | kingdom | phylum | tax |
|---|---|---|---|---|---|---|
| Halobacteria | 1 | 1 | Archaea | Archaea_none | Euryarchaeota | Archaea;Archaea_none;Euryarchaeota;Halobacteria |
| Actinomycetes | 200077 | 199999 | Bacteria | Bacteria_none | Actinomycetota | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes |
| Bacilli | 75183 | 75240 | Bacteria | Bacteria_none | Bacillota | Bacteria;Bacteria_none;Bacillota;Bacilli |
| Clostridia | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacteria;Bacteria_none;Bacillota;Clostridia |
| Cytophagia | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Bacteria;Bacteria_none;Bacteroidota;Cytophagia |
| Flavobacteriia | 1 | 2 | Bacteria | Bacteria_none | Bacteroidota | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia |
| Cyanophyceae | 4 | 4 | Bacteria | Bacteria_none | Cyanobacteriota | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae |
| Phycisphaerae | 1 | 1 | Bacteria | Bacteria_none | Planctomycetota | Bacteria;Bacteria_none;Planctomycetota;Phycisphaerae |
| Alphaproteobacteria | 113 | 114 | Bacteria | Bacteria_none | Pseudomonadota | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria |
| Betaproteobacteria | 110 | 109 | Bacteria | Bacteria_none | Pseudomonadota | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria |
| Gammaproteobacteria | 6 | 6 | Bacteria | Bacteria_none | Pseudomonadota | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria |
| Spirochaetia | 1 | 1 | Bacteria | Bacteria_none | Spirochaetota | Bacteria;Bacteria_none;Spirochaetota;Spirochaetia |
| Mammalia | 34 | 33 | Eukaryota | Metazoa | Chordata | Eukaryota;Metazoa;Chordata;Mammalia |
| Unknown | 7406 | 7427 | Unclassified | Unknown | Unknown | Unclassified;Unknown;Unknown;Unknown |
| Caudoviricetes | 1 | 1 | Viruses | Heunggongvirae | Uroviricota | Viruses;Heunggongvirae;Uroviricota;Caudoviricetes |
Rarefied abundance table for the order rank.
All samples have been randomly subsetted to have the same number of reads.
| order | bc04 | total | superkingdom | kingdom | phylum | class | tax |
|---|---|---|---|---|---|---|---|
| Halobacteriales | 1 | 1 | Archaea | Archaea_none | Euryarchaeota | Halobacteria | Archaea;Archaea_none;Euryarchaeota;Halobacteria;Halobacteriales |
| Actinomycetales | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Actinomycetales |
| Bifidobacteriales | 199995 | 200123 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales |
| Kitasatosporales | 7 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales |
| Micrococcales | 15 | 14 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales |
| Micromonosporales | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales |
| Mycobacteriales | 21 | 24 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales |
| Propionibacteriales | 7 | 7 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales |
| Pseudonocardiales | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales |
| Bacillales | 9 | 9 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales |
| Lactobacillales | 75200 | 75057 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales |
| Eubacteriales | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Clostridia | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales |
| Cytophagales | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales |
| Flavobacteriales | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Flavobacteriia | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales |
| Nostocales | 3 | 3 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Nostocales |
| Pseudanabaenales | 1 | 1 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Pseudanabaenales |
| Phycisphaerales | 1 | 1 | Bacteria | Bacteria_none | Planctomycetota | Phycisphaerae | Bacteria;Bacteria_none;Planctomycetota;Phycisphaerae;Phycisphaerales |
| Caulobacterales | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales |
| Hyphomicrobiales | 80 | 79 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales |
| Rhodobacterales | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales |
| Rhodospirillales | 6 | 6 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales |
| Sphingomonadales | 22 | 23 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales |
| Burkholderiales | 108 | 111 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales |
| Nitrosomonadales | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Nitrosomonadales |
| Enterobacterales | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales |
| Legionellales | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Legionellales |
| Moraxellales | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Moraxellales |
| Xanthomonadales | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Xanthomonadales |
| Leptospirales | 1 | 1 | Bacteria | Bacteria_none | Spirochaetota | Spirochaetia | Bacteria;Bacteria_none;Spirochaetota;Spirochaetia;Leptospirales |
| Primates | 36 | 34 | Eukaryota | Metazoa | Chordata | Mammalia | Eukaryota;Metazoa;Chordata;Mammalia;Primates |
| Unknown | 7404 | 7417 | Unclassified | Unknown | Unknown | Unknown | Unclassified;Unknown;Unknown;Unknown;Unknown |
| Caudoviricetes_Incertae_sedis | 1 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Viruses;Heunggongvirae;Uroviricota;Caudoviricetes;Caudoviricetes_Incertae_sedis |
Rarefied abundance table for the family rank.
All samples have been randomly subsetted to have the same number of reads.
| family | bc04 | total | superkingdom | kingdom | phylum | class | order | tax |
|---|---|---|---|---|---|---|---|---|
| Haloarculaceae | 1 | 1 | Archaea | Archaea_none | Euryarchaeota | Halobacteria | Halobacteriales | Archaea;Archaea_none;Euryarchaeota;Halobacteria;Halobacteriales;Haloarculaceae |
| Actinomycetaceae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Actinomycetales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Actinomycetales;Actinomycetaceae |
| Bifidobacteriaceae | 200114 | 200086 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae |
| Streptomycetaceae | 7 | 7 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae |
| Dermabacteraceae | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Dermabacteraceae |
| Intrasporangiaceae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Intrasporangiaceae |
| Microbacteriaceae | 9 | 8 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae |
| Micrococcaceae | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae |
| Micromonosporaceae | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micromonosporales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales;Micromonosporaceae |
| Corynebacteriaceae | 6 | 5 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae |
| Mycobacteriaceae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Mycobacteriaceae |
| Nocardiaceae | 17 | 18 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Nocardiaceae |
| Nocardioidaceae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Nocardioidaceae |
| Propionibacteriaceae | 6 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Propionibacteriaceae |
| Pseudonocardiaceae | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae |
| Bacillaceae | 8 | 8 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae |
| Carnobacteriaceae | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae |
| Lactobacillaceae | 67029 | 67085 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae |
| Streptococcaceae | 8033 | 8055 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae |
| Clostridiaceae | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae |
| Peptostreptococcaceae | 1 | 0 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptostreptococcaceae |
| Hymenobacteraceae | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Cytophagales | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales;Hymenobacteraceae |
| Flavobacteriaceae | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Flavobacteriia | Flavobacteriales | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae |
| Nostocaceae | 2 | 3 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Nostocales | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Nostocales;Nostocaceae |
| Thermosynechococcaceae | 1 | 1 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Pseudanabaenales | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Pseudanabaenales;Thermosynechococcaceae |
| Phycisphaeraceae | 1 | 1 | Bacteria | Bacteria_none | Planctomycetota | Phycisphaerae | Phycisphaerales | Bacteria;Bacteria_none;Planctomycetota;Phycisphaerae;Phycisphaerales;Phycisphaeraceae |
| Caulobacteraceae | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales;Caulobacteraceae |
| Boseaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Boseaceae |
| Nitrobacteraceae | 52 | 56 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae |
| Phyllobacteriaceae | 25 | 25 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Phyllobacteriaceae |
| Rhizobiaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Rhizobiaceae |
| Roseobacteraceae | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Roseobacteraceae |
| Acetobacteraceae | 5 | 5 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae |
| Azospirillaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Azospirillaceae |
| Erythrobacteraceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae |
| Sphingomonadaceae | 21 | 20 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae |
| Alcaligenaceae | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Alcaligenaceae |
| Burkholderiaceae | 75 | 74 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae |
| Burkholderiales_Incertae_sedis | 7 | 7 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis |
| Comamonadaceae | 19 | 18 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae |
| Oxalobacteraceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Oxalobacteraceae |
| Sphaerotilaceae | 4 | 4 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae |
| Sterolibacteriaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Nitrosomonadales;Sterolibacteriaceae |
| Erwiniaceae | 0 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae |
| Morganellaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Morganellaceae |
| Legionellaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Legionellales | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Legionellales;Legionellaceae |
| Moraxellaceae | 2 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Moraxellales | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Moraxellales;Moraxellaceae |
| Xanthomonadaceae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Xanthomonadales | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae |
| Leptospiraceae | 1 | 1 | Bacteria | Bacteria_none | Spirochaetota | Spirochaetia | Leptospirales | Bacteria;Bacteria_none;Spirochaetota;Spirochaetia;Leptospirales;Leptospiraceae |
| Hominidae | 35 | 34 | Eukaryota | Metazoa | Chordata | Mammalia | Primates | Eukaryota;Metazoa;Chordata;Mammalia;Primates;Hominidae |
| Unknown | 7424 | 7375 | Unclassified | Unknown | Unknown | Unknown | Unknown | Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown |
| Caudoviricetes_Incertae_sedis_Incertae_sedis | 1 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes_Incertae_sedis | Viruses;Heunggongvirae;Uroviricota;Caudoviricetes;Caudoviricetes_Incertae_sedis;Caudoviricetes_Incertae_sedis_Incertae_sedis |
Rarefied abundance table for the genus rank.
All samples have been randomly subsetted to have the same number of reads.
| genus | bc04 | total | superkingdom | kingdom | phylum | class | order | family | tax |
|---|---|---|---|---|---|---|---|---|---|
| Halosiccatus | 1 | 1 | Archaea | Archaea_none | Euryarchaeota | Halobacteria | Halobacteriales | Haloarculaceae | Archaea;Archaea_none;Euryarchaeota;Halobacteria;Halobacteriales;Haloarculaceae;Halosiccatus |
| Arcanobacterium | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Actinomycetales;Actinomycetaceae;Arcanobacterium |
| Bifidobacterium | 200020 | 200046 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium |
| Gardnerella | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Gardnerella |
| Kitasatospora | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Kitasatospora |
| Peterkaempfera | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Peterkaempfera |
| Streptomyces | 5 | 5 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces |
| Brachybacterium | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Dermabacteraceae;Brachybacterium |
| Janibacter | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Intrasporangiaceae;Janibacter |
| Frondihabitans | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Frondihabitans |
| Herbiconiux | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Herbiconiux |
| Homoserinibacter | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Homoserinibacter |
| Microbacterium | 5 | 5 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium |
| Arthrobacter | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Arthrobacter |
| Rothia | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Rothia |
| Actinoplanes | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales;Micromonosporaceae;Actinoplanes |
| Micromonospora | 1 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales;Micromonosporaceae;Micromonospora |
| Corynebacterium | 6 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium |
| Mycobacterium | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Mycobacteriaceae;Mycobacterium |
| Rhodococcus | 16 | 18 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Nocardiaceae;Rhodococcus |
| Nocardioides | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Nocardioidaceae;Nocardioides |
| Cutibacterium | 6 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Propionibacteriaceae;Cutibacterium |
| Actinokineospora | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Actinokineospora |
| Amycolatopsis | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Amycolatopsis |
| Bacillus | 6 | 7 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Bacillus |
| Evansella | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Evansella |
| Weizmannia | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Weizmannia |
| Desemzia | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Desemzia |
| Fructilactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Fructilactobacillus |
| Lacticaseibacillus | 66433 | 66396 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus |
| Lactiplantibacillus | 321 | 319 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus |
| Lactobacillus | 234 | 233 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus |
| Latilactobacillus | 4 | 4 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus |
| Lentilactobacillus | 13 | 12 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus |
| Leuconostoc | 1 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc |
| Levilactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus |
| Ligilactobacillus | 114 | 119 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus |
| Limosilactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus |
| Liquorilactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus |
| Loigolactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Loigolactobacillus |
| Pediococcus | 4 | 4 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus |
| Secundilactobacillus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus |
| Weissella | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Weissella |
| Lactococcus | 32 | 32 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus |
| Streptococcus | 7990 | 7986 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus |
| Clostridium | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium |
| Clostridioides | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Peptostreptococcaceae | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptostreptococcaceae;Clostridioides |
| Hymenobacter | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales;Hymenobacteraceae;Hymenobacter |
| Pontibacter | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales;Hymenobacteraceae;Pontibacter |
| Capnocytophaga | 2 | 2 | Bacteria | Bacteria_none | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga |
| Nostoc | 3 | 3 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Nostocales;Nostocaceae;Nostoc |
| Thermosynechococcus | 1 | 1 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Pseudanabaenales | Thermosynechococcaceae | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Pseudanabaenales;Thermosynechococcaceae;Thermosynechococcus |
| Phycisphaera | 1 | 1 | Bacteria | Bacteria_none | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Bacteria;Bacteria_none;Planctomycetota;Phycisphaerae;Phycisphaerales;Phycisphaeraceae;Phycisphaera |
| Asticcacaulis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Asticcacaulis |
| Caulobacter | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Caulobacter |
| Bosea | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Boseaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Boseaceae;Bosea |
| Afipia | 2 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Afipia |
| Bradyrhizobium | 47 | 47 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium |
| Rhodopseudomonas | 4 | 5 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Rhodopseudomonas |
| Mesorhizobium | 24 | 24 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Phyllobacteriaceae;Mesorhizobium |
| Rhizobium | 0 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Rhizobiaceae;Rhizobium |
| Leisingera | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Roseobacteraceae;Leisingera |
| Octadecabacter | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Roseobacteraceae;Octadecabacter |
| Acetobacter | 0 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter |
| Acidiphilium | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acidiphilium |
| Acidocella | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acidocella |
| Azospirillum | 0 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Azospirillaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Azospirillaceae;Azospirillum |
| Erythrobacter | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Erythrobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter |
| Sphingobium | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium |
| Sphingomonas | 21 | 20 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas |
| Achromobacter | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Achromobacter |
| Pigmentiphaga | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Pigmentiphaga |
| Burkholderia | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia |
| Cupriavidus | 68 | 65 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus |
| Paraburkholderia | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Paraburkholderia |
| Ralstonia | 5 | 6 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia |
| Aquabacterium | 5 | 5 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Aquabacterium |
| Paucibacter | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Paucibacter |
| Xylophilus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Xylophilus |
| Acidovorax | 9 | 9 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax |
| Comamonas | 3 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas |
| Hydrogenophaga | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Hydrogenophaga |
| Kinneretia | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Kinneretia |
| Variovorax | 4 | 4 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Variovorax |
| Herbaspirillum | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Herbaspirillum |
| Aquincola | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Aquincola |
| Caldimonas | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Caldimonas |
| Methylibium | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Methylibium |
| Rubrivivax | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Rubrivivax |
| Methyloversatilis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Sterolibacteriaceae | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Nitrosomonadales;Sterolibacteriaceae;Methyloversatilis |
| Pantoea | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Pantoea |
| Xenorhabdus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Morganellaceae | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Morganellaceae;Xenorhabdus |
| Legionella | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Legionellales | Legionellaceae | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Legionellales;Legionellaceae;Legionella |
| Acinetobacter | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Moraxellales;Moraxellaceae;Acinetobacter |
| Stenotrophomonas | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas |
| Leptospira | 0 | 1 | Bacteria | Bacteria_none | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Bacteria;Bacteria_none;Spirochaetota;Spirochaetia;Leptospirales;Leptospiraceae;Leptospira |
| Homo | 36 | 35 | Eukaryota | Metazoa | Chordata | Mammalia | Primates | Hominidae | Eukaryota;Metazoa;Chordata;Mammalia;Primates;Hominidae;Homo |
| Unknown | 7425 | 7433 | Unclassified | Unknown | Unknown | Unknown | Unknown | Unknown | Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown |
| Larmunavirus | 1 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes_Incertae_sedis | Caudoviricetes_Incertae_sedis_Incertae_sedis | Viruses;Heunggongvirae;Uroviricota;Caudoviricetes;Caudoviricetes_Incertae_sedis;Caudoviricetes_Incertae_sedis_Incertae_sedis;Larmunavirus |
Rarefied abundance table for the species rank.
All samples have been randomly subsetted to have the same number of reads.
| species | bc04 | total | superkingdom | kingdom | phylum | class | order | family | genus | tax |
|---|---|---|---|---|---|---|---|---|---|---|
| Halosiccatus urmianus | 1 | 1 | Archaea | Archaea_none | Euryarchaeota | Halobacteria | Halobacteriales | Haloarculaceae | Halosiccatus | Archaea;Archaea_none;Euryarchaeota;Halobacteria;Halobacteriales;Haloarculaceae;Halosiccatus;Halosiccatus urmianus |
| Arcanobacterium haemolyticum | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Arcanobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Actinomycetales;Actinomycetaceae;Arcanobacterium;Arcanobacterium haemolyticum |
| Bifidobacterium actinocoloniiforme | 12 | 12 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium actinocoloniiforme |
| Bifidobacterium adolescentis | 30 | 27 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium adolescentis |
| Bifidobacterium angulatum | 26 | 27 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium angulatum |
| Bifidobacterium animalis | 212 | 215 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium animalis |
| Bifidobacterium asteroides | 17 | 17 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium asteroides |
| Bifidobacterium bifidum | 197298 | 197402 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium bifidum |
| Bifidobacterium breve | 83 | 79 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium breve |
| Bifidobacterium catenulatum | 14 | 14 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium catenulatum |
| Bifidobacterium choerinum | 10 | 10 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium choerinum |
| Bifidobacterium coryneforme | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium coryneforme |
| Bifidobacterium dentium | 23 | 23 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium dentium |
| Bifidobacterium eulemuris | 11 | 13 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium eulemuris |
| Bifidobacterium imperatoris | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium imperatoris |
| Bifidobacterium lemurum | 17 | 16 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium lemurum |
| Bifidobacterium longum | 333 | 326 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium longum |
| Bifidobacterium pseudocatenulatum | 26 | 25 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium pseudocatenulatum |
| Bifidobacterium pseudolongum | 20 | 20 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium pseudolongum |
| Bifidobacterium pullorum | 31 | 29 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium pullorum |
| Bifidobacterium saguini | 4 | 4 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium saguini |
| Bifidobacterium scardovii | 73 | 71 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium scardovii |
| Bifidobacterium sp. SKU | 1361 | 1366 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium sp. SKU |
| Bifidobacterium sp. TKU | 355 | 355 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium sp. TKU |
| Bifidobacterium subtile | 16 | 17 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium subtile |
| Bifidobacterium thermophilum | 16 | 18 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium thermophilum |
| Gardnerella swidsinskii | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Gardnerella | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Gardnerella;Gardnerella swidsinskii |
| Gardnerella vaginalis | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Gardnerella | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Gardnerella;Gardnerella vaginalis |
| Kitasatospora setae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Kitasatospora | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Kitasatospora;Kitasatospora setae |
| Peterkaempfera bronchialis | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Peterkaempfera | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Peterkaempfera;Peterkaempfera bronchialis |
| Streptomyces avermitilis | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces;Streptomyces avermitilis |
| Streptomyces goshikiensis | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces;Streptomyces goshikiensis |
| Streptomyces noursei | 0 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces;Streptomyces noursei |
| Streptomyces sp. HM190 | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Kitasatosporales;Streptomycetaceae;Streptomyces;Streptomyces sp. HM190 |
| Brachybacterium faecium | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Brachybacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Dermabacteraceae;Brachybacterium;Brachybacterium faecium |
| Janibacter limosus | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Janibacter | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Intrasporangiaceae;Janibacter;Janibacter limosus |
| Frondihabitans sucicola | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Frondihabitans | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Frondihabitans;Frondihabitans sucicola |
| Herbiconiux sp. SALV-R1 | 1 | 0 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Herbiconiux | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Herbiconiux;Herbiconiux sp. SALV-R1 |
| Homoserinibacter sp. YIM 151385 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Homoserinibacter | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Homoserinibacter;Homoserinibacter sp. YIM 151385 |
| Microbacterium sp. BH-3-3-3 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium sp. BH-3-3-3 |
| Microbacterium sp. Clip185 | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium sp. Clip185 |
| Microbacterium sp. RG1 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium sp. RG1 |
| Microbacterium sp. YJN-G | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium sp. YJN-G |
| Microbacterium sp. cx-55 | 0 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium sp. cx-55 |
| Arthrobacter koreensis | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Arthrobacter;Arthrobacter koreensis |
| Rothia kristinae | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Rothia;Rothia kristinae |
| Actinoplanes missouriensis | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Actinoplanes | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales;Micromonosporaceae;Actinoplanes;Actinoplanes missouriensis |
| Micromonospora sp. WMMD812 | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonospora | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micromonosporales;Micromonosporaceae;Micromonospora;Micromonospora sp. WMMD812 |
| Corynebacterium caspium | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium;Corynebacterium caspium |
| Corynebacterium hansenii | 2 | 2 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium;Corynebacterium hansenii |
| Corynebacterium jeikeium | 3 | 3 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium;Corynebacterium jeikeium |
| Mycobacterium malmoense | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Mycobacteriaceae;Mycobacterium;Mycobacterium malmoense |
| Rhodococcus fascians | 17 | 17 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Nocardiaceae;Rhodococcus;Rhodococcus fascians |
| Nocardioides sp. InS609-2 | 0 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Nocardioidaceae;Nocardioides;Nocardioides sp. InS609-2 |
| Cutibacterium acnes | 4 | 6 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Propionibacteriales;Propionibacteriaceae;Cutibacterium;Cutibacterium acnes |
| Actinokineospora sp. UTMC 2448 | 0 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Actinokineospora | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Actinokineospora;Actinokineospora sp. UTMC 2448 |
| Amycolatopsis methanolica | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Amycolatopsis;Amycolatopsis methanolica |
| Amycolatopsis sp. YIM 10 | 1 | 1 | Bacteria | Bacteria_none | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Amycolatopsis;Amycolatopsis sp. YIM 10 |
| Bacillus cereus | 5 | 5 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Bacillus;Bacillus cereus |
| Bacillus smithii | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Bacillus;Bacillus smithii |
| Bacillus thuringiensis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Bacillus;Bacillus thuringiensis |
| Evansella sp. LMS18 | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Evansella | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Evansella;Evansella sp. LMS18 |
| Weizmannia coagulans | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Bacillales | Bacillaceae | Weizmannia | Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Bacillaceae;Weizmannia;Weizmannia coagulans |
| Desemzia incerta | 1 | 0 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Desemzia | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Desemzia;Desemzia incerta |
| Fructilactobacillus lindneri | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Fructilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Fructilactobacillus;Fructilactobacillus lindneri |
| Lacticaseibacillus casei | 16 | 16 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus casei |
| Lacticaseibacillus chiayiensis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus chiayiensis |
| Lacticaseibacillus manihotivorans | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus manihotivorans |
| Lacticaseibacillus paracasei | 214 | 213 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus paracasei |
| Lacticaseibacillus rhamnosus | 66218 | 66116 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus rhamnosus |
| Lactiplantibacillus argentoratensis | 0 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus argentoratensis |
| Lactiplantibacillus paraplantarum | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus paraplantarum |
| Lactiplantibacillus pentosus | 1 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus pentosus |
| Lactiplantibacillus plantarum | 308 | 319 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus plantarum |
| Lactobacillus acetotolerans | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus acetotolerans |
| Lactobacillus acidophilus | 180 | 185 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus acidophilus |
| Lactobacillus amylovorus | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus amylovorus |
| Lactobacillus delbrueckii | 8 | 8 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus delbrueckii |
| Lactobacillus helveticus | 37 | 38 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus helveticus |
| Lactobacillus iners | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus iners |
| Lactobacillus kefiranofaciens | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus kefiranofaciens |
| Latilactobacillus curvatus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Latilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus;Latilactobacillus curvatus |
| Latilactobacillus sakei | 4 | 4 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Latilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus;Latilactobacillus sakei |
| Lentilactobacillus buchneri | 12 | 13 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lentilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus buchneri |
| Leuconostoc garlicum | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc;Leuconostoc garlicum |
| Levilactobacillus brevis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Levilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus;Levilactobacillus brevis |
| Ligilactobacillus salivarius | 117 | 118 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Ligilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus salivarius |
| Limosilactobacillus fermentum | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Limosilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus fermentum |
| Liquorilactobacillus nagelii | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Liquorilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus;Liquorilactobacillus nagelii |
| Loigolactobacillus coryniformis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Loigolactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Loigolactobacillus;Loigolactobacillus coryniformis |
| Pediococcus acidilactici | 1 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus acidilactici |
| Pediococcus claussenii | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus claussenii |
| Pediococcus pentosaceus | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus pentosaceus |
| Secundilactobacillus paracollinoides | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Secundilactobacillus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus;Secundilactobacillus paracollinoides |
| Weissella paramesenteroides | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella paramesenteroides |
| Lactococcus cremoris | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus cremoris |
| Lactococcus lactis | 31 | 31 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus lactis |
| Streptococcus agalactiae | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus agalactiae |
| Streptococcus chenjunshii | 0 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus chenjunshii |
| Streptococcus equi | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus equi |
| Streptococcus equinus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus equinus |
| Streptococcus gallolyticus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus gallolyticus |
| Streptococcus iniae | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus iniae |
| Streptococcus mitis | 1 | 0 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus mitis |
| Streptococcus pneumoniae | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus pneumoniae |
| Streptococcus pyogenes | 2 | 2 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus pyogenes |
| Streptococcus salivarius | 3 | 3 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus salivarius |
| Streptococcus sanguinis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus sanguinis |
| Streptococcus sobrinus | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus sobrinus |
| Streptococcus sp. zg-86 | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus sp. zg-86 |
| Streptococcus suis | 0 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus suis |
| Streptococcus thermophilus | 8011 | 7981 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus thermophilus |
| Streptococcus vestibularis | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus vestibularis |
| Clostridium sporogenes | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium sporogenes |
| Clostridioides difficile | 1 | 1 | Bacteria | Bacteria_none | Bacillota | Clostridia | Eubacteriales | Peptostreptococcaceae | Clostridioides | Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptostreptococcaceae;Clostridioides;Clostridioides difficile |
| Hymenobacter sp. YIM 151500-1 | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales;Hymenobacteraceae;Hymenobacter;Hymenobacter sp. YIM 151500-1 |
| Pontibacter russatus | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Pontibacter | Bacteria;Bacteria_none;Bacteroidota;Cytophagia;Cytophagales;Hymenobacteraceae;Pontibacter;Pontibacter russatus |
| Capnocytophaga canimorsus | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Capnocytophaga | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga;Capnocytophaga canimorsus |
| Capnocytophaga stomatis | 1 | 1 | Bacteria | Bacteria_none | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Capnocytophaga | Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga;Capnocytophaga stomatis |
| Nostoc sp. C057 | 3 | 3 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Nostocales;Nostocaceae;Nostoc;Nostoc sp. C057 |
| Thermosynechococcus vestitus | 1 | 1 | Bacteria | Bacteria_none | Cyanobacteriota | Cyanophyceae | Pseudanabaenales | Thermosynechococcaceae | Thermosynechococcus | Bacteria;Bacteria_none;Cyanobacteriota;Cyanophyceae;Pseudanabaenales;Thermosynechococcaceae;Thermosynechococcus;Thermosynechococcus vestitus |
| Phycisphaera mikurensis | 1 | 1 | Bacteria | Bacteria_none | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaera | Bacteria;Bacteria_none;Planctomycetota;Phycisphaerae;Phycisphaerales;Phycisphaeraceae;Phycisphaera;Phycisphaera mikurensis |
| Asticcacaulis excentricus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Asticcacaulis | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Asticcacaulis;Asticcacaulis excentricus |
| Caulobacter flavus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Caulobacter | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Caulobacterales;Caulobacteraceae;Caulobacter;Caulobacter flavus |
| Bosea vaviloviae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Boseaceae | Bosea | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Boseaceae;Bosea;Bosea vaviloviae |
| Afipia carboxidovorans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Afipia | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Afipia;Afipia carboxidovorans |
| Afipia sp. NBIMC_P1-C1 | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Afipia | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Afipia;Afipia sp. NBIMC_P1-C1 |
| Bradyrhizobium australafricanum | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium australafricanum |
| Bradyrhizobium betae | 7 | 9 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium betae |
| Bradyrhizobium erythrophlei | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium erythrophlei |
| Bradyrhizobium genosp. B | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium genosp. B |
| Bradyrhizobium genosp. L | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium genosp. L |
| Bradyrhizobium guangdongense | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium guangdongense |
| Bradyrhizobium japonicum | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium japonicum |
| Bradyrhizobium lablabi | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium lablabi |
| Bradyrhizobium sediminis | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sediminis |
| Bradyrhizobium sp. 1(2017) | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. 1(2017) |
| Bradyrhizobium sp. 41S5 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. 41S5 |
| Bradyrhizobium sp. 6(2017) | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. 6(2017) |
| Bradyrhizobium sp. A19 | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. A19 |
| Bradyrhizobium sp. C-145 | 2 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. C-145 |
| Bradyrhizobium sp. CB1024 | 1 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. CB1024 |
| Bradyrhizobium sp. CCBAU 051011 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. CCBAU 051011 |
| Bradyrhizobium sp. CCBAU 51765 | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. CCBAU 51765 |
| Bradyrhizobium sp. CCBAU 53421 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. CCBAU 53421 |
| Bradyrhizobium sp. ORS 285 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. ORS 285 |
| Bradyrhizobium sp. SK17 | 10 | 9 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Bradyrhizobium;Bradyrhizobium sp. SK17 |
| Rhodopseudomonas palustris | 5 | 4 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Rhodopseudomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Rhodopseudomonas;Rhodopseudomonas palustris |
| Mesorhizobium terrae | 25 | 22 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Mesorhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Phyllobacteriaceae;Mesorhizobium;Mesorhizobium terrae |
| Rhizobium sp. AB2/73 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Hyphomicrobiales;Rhizobiaceae;Rhizobium;Rhizobium sp. AB2/73 |
| Leisingera methylohalidivorans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Leisingera | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Roseobacteraceae;Leisingera;Leisingera methylohalidivorans |
| Octadecabacter sp. SW4 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Octadecabacter | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Roseobacteraceae;Octadecabacter;Octadecabacter sp. SW4 |
| Acetobacter ghanensis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Acetobacter | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acetobacter;Acetobacter ghanensis |
| Acidiphilium multivorum | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Acidiphilium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acidiphilium;Acidiphilium multivorum |
| Acidocella sp. MX-AZ03 | 3 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Acetobacteraceae | Acidocella | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Acidocella;Acidocella sp. MX-AZ03 |
| Azospirillum brasilense | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Azospirillaceae | Azospirillum | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Rhodospirillales;Azospirillaceae;Azospirillum;Azospirillum brasilense |
| Erythrobacter mangrovi | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Erythrobacteraceae | Erythrobacter | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Erythrobacteraceae;Erythrobacter;Erythrobacter mangrovi |
| Sphingobium cloacae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingobium | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingobium;Sphingobium cloacae |
| Sphingomonas alpina | 1 | 0 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas alpina |
| Sphingomonas sanxanigenens | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sanxanigenens |
| Sphingomonas sp. FARSPH | 1 | 0 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. FARSPH |
| Sphingomonas sp. LM7 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. LM7 |
| Sphingomonas sp. NIBR 02145 | 12 | 14 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. NIBR 02145 |
| Sphingomonas sp. QA11 | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. QA11 |
| Sphingomonas sp. R1 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Bacteria;Bacteria_none;Pseudomonadota;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas sp. R1 |
| Achromobacter xylosoxidans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Achromobacter | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Achromobacter;Achromobacter xylosoxidans |
| Pigmentiphaga sp. H8 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Pigmentiphaga | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Alcaligenaceae;Pigmentiphaga;Pigmentiphaga sp. H8 |
| Burkholderia ambifaria | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia;Burkholderia ambifaria |
| Burkholderia contaminans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia;Burkholderia contaminans |
| Burkholderia pyrrocinia | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Burkholderia;Burkholderia pyrrocinia |
| Cupriavidus basilensis | 1 | 0 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus basilensis |
| Cupriavidus campinensis | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus campinensis |
| Cupriavidus metallidurans | 21 | 23 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus metallidurans |
| Cupriavidus nantongensis | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus nantongensis |
| Cupriavidus necator | 3 | 3 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus necator |
| Cupriavidus pauculus | 14 | 14 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus pauculus |
| Cupriavidus pinatubonensis | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus pinatubonensis |
| Cupriavidus sp. EM10 | 13 | 15 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus sp. EM10 |
| Cupriavidus sp. P-10 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus sp. P-10 |
| Cupriavidus sp. U2 | 3 | 4 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus sp. U2 |
| Paraburkholderia fungorum | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Paraburkholderia;Paraburkholderia fungorum |
| Ralstonia insidiosa | 6 | 6 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia;Ralstonia insidiosa |
| Ralstonia pseudosolanacearum | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia;Ralstonia pseudosolanacearum |
| Aquabacterium olei | 4 | 4 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Aquabacterium | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Aquabacterium;Aquabacterium olei |
| Paucibacter aquatile | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Paucibacter | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Paucibacter;Paucibacter aquatile |
| Paucibacter sp. KCTC 42545 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Paucibacter | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Paucibacter;Paucibacter sp. KCTC 42545 |
| Xylophilus rhododendri | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales_Incertae_sedis | Xylophilus | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Xylophilus;Xylophilus rhododendri |
| Acidovorax antarcticus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax;Acidovorax antarcticus |
| Acidovorax avenae | 4 | 5 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax;Acidovorax avenae |
| Acidovorax carolinensis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax;Acidovorax carolinensis |
| Acidovorax sp. GBBC 1281 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Acidovorax;Acidovorax sp. GBBC 1281 |
| Comamonas serinivorans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas;Comamonas serinivorans |
| Comamonas sp. NLF-1-9 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas;Comamonas sp. NLF-1-9 |
| Comamonas sp. NLF-7-7 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Comamonas;Comamonas sp. NLF-7-7 |
| Hydrogenophaga sp. SL48 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hydrogenophaga | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Hydrogenophaga;Hydrogenophaga sp. SL48 |
| Kinneretia sp. DAIF2 | 2 | 2 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Kinneretia | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Kinneretia;Kinneretia sp. DAIF2 |
| Variovorax sp. PAMC28562 | 4 | 4 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Variovorax;Variovorax sp. PAMC28562 |
| Herbaspirillum robiniae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Oxalobacteraceae;Herbaspirillum;Herbaspirillum robiniae |
| Aquincola tertiaricarbonis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Aquincola | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Aquincola;Aquincola tertiaricarbonis |
| Caldimonas brevitalea | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Caldimonas | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Caldimonas;Caldimonas brevitalea |
| Methylibium sp. Pch-M | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Methylibium | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Methylibium;Methylibium sp. Pch-M |
| Rubrivivax gelatinosus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Rubrivivax | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sphaerotilaceae;Rubrivivax;Rubrivivax gelatinosus |
| Methyloversatilis sp. RAC08 | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Sterolibacteriaceae | Methyloversatilis | Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Nitrosomonadales;Sterolibacteriaceae;Methyloversatilis;Methyloversatilis sp. RAC08 |
| Pantoea vagans | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Pantoea | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Pantoea;Pantoea vagans |
| Xenorhabdus griffiniae | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Morganellaceae | Xenorhabdus | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Morganellaceae;Xenorhabdus;Xenorhabdus griffiniae |
| Legionella spiritensis | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Legionellales | Legionellaceae | Legionella | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Legionellales;Legionellaceae;Legionella;Legionella spiritensis |
| Acinetobacter indicus | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Moraxellales;Moraxellaceae;Acinetobacter;Acinetobacter indicus |
| Acinetobacter seifertii | 0 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Moraxellales;Moraxellaceae;Acinetobacter;Acinetobacter seifertii |
| Stenotrophomonas maltophilia | 1 | 1 | Bacteria | Bacteria_none | Pseudomonadota | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Stenotrophomonas | Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas;Stenotrophomonas maltophilia |
| Leptospira sp. severe_002 | 1 | 1 | Bacteria | Bacteria_none | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Bacteria;Bacteria_none;Spirochaetota;Spirochaetia;Leptospirales;Leptospiraceae;Leptospira;Leptospira sp. severe_002 |
| Homo sapiens | 34 | 36 | Eukaryota | Metazoa | Chordata | Mammalia | Primates | Hominidae | Homo | Eukaryota;Metazoa;Chordata;Mammalia;Primates;Hominidae;Homo;Homo sapiens |
| Unknown | 7415 | 7419 | Unclassified | Unknown | Unknown | Unknown | Unknown | Unknown | Unknown | Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown |
| Larmunavirus Lrm1 | 1 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes_Incertae_sedis | Caudoviricetes_Incertae_sedis_Incertae_sedis | Larmunavirus | Viruses;Heunggongvirae;Uroviricota;Caudoviricetes;Caudoviricetes_Incertae_sedis;Caudoviricetes_Incertae_sedis_Incertae_sedis;Larmunavirus;Larmunavirus Lrm1 |
Alpha Diversity
Sample diversity indices. Indices are calculated from the original abundance table.
| Indices | bc04 | total |
|---|---|---|
| Berger Parker index | 0.7 | 0.7 |
| Effective number of species | 2.43 | 2.43 |
| Fisher's alpha | 22.44 | 22.44 |
| Inverse Simpson's index | 2.19 | 2.19 |
| Pielou's evenness | 0.17 | 0.17 |
| Richness | 213.0 | 213.0 |
| Shannon diversity index | 0.89 | 0.89 |
| Simpson's index | 0.46 | 0.46 |
| Total counts | 297834.0 | 297834.0 |
Sample-based rarefaction curves to display observed taxa richness. Sample size shows the number of reads sampled from the total amount of reads analyzed during the real time analysis. The Y-axis indicates the number of unique taxa at the last analyzed taxonomic rank in those subsampled reads.
This plot includes all the counts (except Unknown),
previous to apply any filter threshold based on abundances.