wf-metagenomics Sequencing Report

Barplot of the 9 most abundant taxa at the class rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 9 most abundant taxa at the order rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 9 most abundant taxa at the family rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 9 most abundant taxa at the genus rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 9 most abundant taxa at the species rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Abundance table for the class rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

Abundance table for the order rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

Abundance table for the family rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

Abundance table for the genus rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

Abundance table for the species rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

Rarefied abundance table for the phylum rank.

All samples have been randomly subsetted to have the same number of reads.

Rarefied abundance table for the class rank.

All samples have been randomly subsetted to have the same number of reads.

Rarefied abundance table for the order rank.

All samples have been randomly subsetted to have the same number of reads.

Rarefied abundance table for the family rank.

All samples have been randomly subsetted to have the same number of reads.

Rarefied abundance table for the genus rank.

All samples have been randomly subsetted to have the same number of reads.

Rarefied abundance table for the species rank.

All samples have been randomly subsetted to have the same number of reads.

Sample-based rarefaction curves to display observed taxa richness. Sample size shows the number of reads sampled from the total amount of reads analyzed during the real time analysis. The Y-axis indicates the number of unique taxa at the last analyzed taxonomic rank in those subsampled reads.