Read summary

Samples summary

Lineages

Sunburst

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

Taxonomy

Barplot of the 9 most abundant taxa at the phylum rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 9 most abundant taxa at the class rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 9 most abundant taxa at the order rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 9 most abundant taxa at the family rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 9 most abundant taxa at the genus rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 9 most abundant taxa at the species rank. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Abundances

Abundance table for the phylum rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

phylum barcode08 total superkingdom kingdom tax
Actinobacteria 26 26 Bacteria Bacteria_none Bacteria;Bacteria_none;Actinobacteria
Firmicutes 29684 29684 Bacteria Bacteria_none Bacteria;Bacteria_none;Firmicutes
Proteobacteria 86 86 Bacteria Bacteria_none Bacteria;Bacteria_none;Proteobacteria
Unknown 16961 16961 Unclassified Unknown Unclassified;Unknown;Unknown

Abundance table for the class rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

class barcode08 total superkingdom kingdom phylum tax
Actinomycetia 24 24 Bacteria Bacteria_none Actinobacteria Bacteria;Bacteria_none;Actinobacteria;Actinomycetia
Bacilli 29653 29653 Bacteria Bacteria_none Firmicutes Bacteria;Bacteria_none;Firmicutes;Bacilli
Clostridia 18 18 Bacteria Bacteria_none Firmicutes Bacteria;Bacteria_none;Firmicutes;Clostridia
Desulfuribacillia 2 2 Bacteria Bacteria_none Firmicutes Bacteria;Bacteria_none;Firmicutes;Desulfuribacillia
Erysipelotrichia 10 10 Bacteria Bacteria_none Firmicutes Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia
Alphaproteobacteria 4 4 Bacteria Bacteria_none Proteobacteria Bacteria;Bacteria_none;Proteobacteria;Alphaproteobacteria
Betaproteobacteria 11 11 Bacteria Bacteria_none Proteobacteria Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria
Deltaproteobacteria 2 2 Bacteria Bacteria_none Proteobacteria Bacteria;Bacteria_none;Proteobacteria;Deltaproteobacteria
Gammaproteobacteria 69 69 Bacteria Bacteria_none Proteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria
Unknown 16961 16961 Unclassified Unknown Unknown Unclassified;Unknown;Unknown;Unknown

Abundance table for the order rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

order barcode08 total superkingdom kingdom phylum class tax
Bifidobacteriales 14 14 Bacteria Bacteria_none Actinobacteria Actinomycetia Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Bifidobacteriales
Micrococcales 8 8 Bacteria Bacteria_none Actinobacteria Actinomycetia Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Micrococcales
Bacillales 478 478 Bacteria Bacteria_none Firmicutes Bacilli Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales
Lactobacillales 29175 29175 Bacteria Bacteria_none Firmicutes Bacilli Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales
Eubacteriales 18 18 Bacteria Bacteria_none Firmicutes Clostridia Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales
Desulfuribacillales 2 2 Bacteria Bacteria_none Firmicutes Desulfuribacillia Bacteria;Bacteria_none;Firmicutes;Desulfuribacillia;Desulfuribacillales
Erysipelotrichales 10 10 Bacteria Bacteria_none Firmicutes Erysipelotrichia Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales
Hyphomicrobiales 3 3 Bacteria Bacteria_none Proteobacteria Alphaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Alphaproteobacteria;Hyphomicrobiales
Burkholderiales 11 11 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales
Alteromonadales 23 23 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales
Enterobacterales 37 37 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales
Oceanospirillales 4 4 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Oceanospirillales
Pseudomonadales 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Pseudomonadales
Vibrionales 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Vibrionales
Unknown 16961 16961 Unclassified Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown

Abundance table for the family rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

family barcode08 total superkingdom kingdom phylum class order tax
Bifidobacteriaceae 14 14 Bacteria Bacteria_none Actinobacteria Actinomycetia Bifidobacteriales Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Bifidobacteriales;Bifidobacteriaceae
Microbacteriaceae 6 6 Bacteria Bacteria_none Actinobacteria Actinomycetia Micrococcales Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Micrococcales;Microbacteriaceae
Micrococcaceae 2 2 Bacteria Bacteria_none Actinobacteria Actinomycetia Micrococcales Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Micrococcales;Micrococcaceae
Alicyclobacillaceae 40 40 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae
Bacillaceae 200 200 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae
Bacillales_Incertae_sedis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillales_Incertae_sedis
Listeriaceae 41 41 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae
Paenibacillaceae 137 137 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae
Planococcaceae 18 18 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae
Staphylococcaceae 16 16 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae
Thermoactinomycetaceae 19 19 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae
Aerococcaceae 81 81 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae
Carnobacteriaceae 16 16 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae
Enterococcaceae 183 183 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae
Lactobacillaceae 27309 27309 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae
Streptococcaceae 1586 1586 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae
Clostridiaceae 4 4 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Clostridiaceae
Lachnospiraceae 3 3 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae
Oscillospiraceae 7 7 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Oscillospiraceae
Desulfuribacillaceae 2 2 Bacteria Bacteria_none Firmicutes Desulfuribacillia Desulfuribacillales Bacteria;Bacteria_none;Firmicutes;Desulfuribacillia;Desulfuribacillales;Desulfuribacillaceae
Erysipelotrichaceae 10 10 Bacteria Bacteria_none Firmicutes Erysipelotrichia Erysipelotrichales Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae
Nitrobacteraceae 3 3 Bacteria Bacteria_none Proteobacteria Alphaproteobacteria Hyphomicrobiales Bacteria;Bacteria_none;Proteobacteria;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae
Burkholderiaceae 6 6 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae
Burkholderiales_Incertae_sedis 4 4 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis
Alteromonadaceae 18 18 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae
Psychromonadaceae 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Psychromonadaceae
Enterobacteriaceae 22 22 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae
Erwiniaceae 13 13 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Erwiniaceae
Halomonadaceae 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Oceanospirillales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae
Pseudomonadaceae 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Pseudomonadales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae
Vibrionaceae 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Vibrionales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae
Unknown 16961 16961 Unclassified Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown

Abundance table for the genus rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

genus barcode08 total superkingdom kingdom phylum class order family tax
Bifidobacterium 14 14 Bacteria Bacteria_none Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium
Microbacterium 6 6 Bacteria Bacteria_none Actinobacteria Actinomycetia Micrococcales Microbacteriaceae Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Micrococcales;Microbacteriaceae;Microbacterium
Alicyclobacillus 39 39 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus
Alkalihalobacillus 14 14 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alkalihalobacillus
Alteribacillus 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alteribacillus
Anaerobacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Anaerobacillus
Anoxybacillus 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Anoxybacillus
Bacillus 17 17 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus
Cytobacillus 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Cytobacillus
Gracilibacillus 9 9 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Gracilibacillus
Halalkalibacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Halalkalibacillus
Halobacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Halobacillus
Halolactibacillus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Halolactibacillus
Lentibacillus 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Lentibacillus
Litchfieldia 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Litchfieldia
Lysinibacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Lysinibacillus
Mangrovibacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Mangrovibacillus
Margalitia 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Margalitia
Mesobacillus 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Mesobacillus
Metabacillus 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Metabacillus
Oceanobacillus 27 27 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Oceanobacillus
Ornithinibacillus 7 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Ornithinibacillus
Parageobacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Parageobacillus
Psychrobacillus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Psychrobacillus
Pueribacillus 11 11 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Pueribacillus
Robertmurraya 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Robertmurraya
Rossellomorea 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Rossellomorea
Salicibibacter 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Salicibibacter
Saliterribacillus 10 10 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Saliterribacillus
Virgibacillus 16 16 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Virgibacillus
Exiguobacterium 5 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillales_Incertae_sedis Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillales_Incertae_sedis;Exiguobacterium
Brochothrix 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Brochothrix
Listeria 39 39 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria
Brevibacillus 14 14 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus
Cohnella 5 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Cohnella
Fontibacillus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Fontibacillus
Paenibacillus 114 114 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus
Jeotgalibacillus 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Jeotgalibacillus
Planococcus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Planococcus
Savagea 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Savagea
Ureibacillus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Ureibacillus
Abyssicoccus 7 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Staphylococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Abyssicoccus
Aliicoccus 5 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Staphylococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Aliicoccus
Staphylococcus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Staphylococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus
Geothermomicrobium 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Geothermomicrobium
Planifilum 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Planifilum
Thermoactinomyces 10 10 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Thermoactinomyces
Thermoflavimicrobium 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Thermoflavimicrobium
Abiotrophia 38 38 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Aerococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae;Abiotrophia
Suicoccus 42 42 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Aerococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae;Suicoccus
Carnobacterium 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Carnobacterium
Granulicatella 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella
Trichococcus 7 7 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Trichococcus
Enterococcus 177 177 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus
Vagococcus 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Vagococcus
Apilactobacillus 7 7 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Apilactobacillus
Companilactobacillus 35 35 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus
Dellaglioa 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Dellaglioa
Fructilactobacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Fructilactobacillus
Furfurilactobacillus 39 39 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Furfurilactobacillus
Lacticaseibacillus 5755 5755 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus
Lactiplantibacillus 17711 17711 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus
Lactobacillus 1548 1548 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus
Lapidilactobacillus 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lapidilactobacillus
Latilactobacillus 355 355 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus
Lentilactobacillus 1520 1520 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus
Leuconostoc 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc
Levilactobacillus 26 26 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus
Ligilactobacillus 16 16 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus
Limosilactobacillus 76 76 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus
Liquorilactobacillus 22 22 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus
Loigolactobacillus 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Loigolactobacillus
Paucilactobacillus 80 80 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Paucilactobacillus
Pediococcus 39 39 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus
Periweissella 13 13 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Periweissella
Secundilactobacillus 11 11 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus
Weissella 35 35 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella
Lactococcus 1027 1027 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus
Streptococcus 559 559 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus
Caloramator 2 2 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Clostridiaceae Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Clostridiaceae;Caloramator
Syntrophococcus 2 2 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Lachnospiraceae Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae;Syntrophococcus
Acutalibacter 6 6 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Oscillospiraceae Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Oscillospiraceae;Acutalibacter
Desulfuribacillus 2 2 Bacteria Bacteria_none Firmicutes Desulfuribacillia Desulfuribacillales Desulfuribacillaceae Bacteria;Bacteria_none;Firmicutes;Desulfuribacillia;Desulfuribacillales;Desulfuribacillaceae;Desulfuribacillus
Lactimicrobium 5 5 Bacteria Bacteria_none Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Lactimicrobium
Stecheria 3 3 Bacteria Bacteria_none Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Stecheria
Afipia 2 2 Bacteria Bacteria_none Proteobacteria Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bacteria;Bacteria_none;Proteobacteria;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Afipia
Cupriavidus 6 6 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus
Aquabacterium 3 3 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Burkholderiales_Incertae_sedis Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Aquabacterium
Alteromonas 9 9 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Alteromonas
Paraglaciecola 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Paraglaciecola
Salinimonas 5 5 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Salinimonas
Corallincola 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Psychromonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Psychromonadaceae;Corallincola
Citrobacter 4 4 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Citrobacter
Cronobacter 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Cronobacter
Enterobacter 4 4 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Enterobacter
Escherichia 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia
Salmonella 5 5 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Salmonella
Siccibacter 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Siccibacter
Mixta 12 12 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Erwiniaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Mixta
Halomonas 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Halomonas
Pseudomonas 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas
Unknown 16961 16961 Unclassified Unknown Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown

Abundance table for the species rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

species barcode08 total superkingdom kingdom phylum class order family genus tax
Bifidobacterium animalis 9 9 Bacteria Bacteria_none Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium animalis
Bifidobacterium longum 3 3 Bacteria Bacteria_none Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium longum
Microbacterium pseudoresistens 5 5 Bacteria Bacteria_none Actinobacteria Actinomycetia Micrococcales Microbacteriaceae Microbacterium Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium pseudoresistens
Alicyclobacillus contaminans 7 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus contaminans
Alicyclobacillus kakegawensis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus kakegawensis
Alicyclobacillus macrosporangiidus 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus macrosporangiidus
Alicyclobacillus sacchari 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus sacchari
Alicyclobacillus sendaiensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus sendaiensis
Alicyclobacillus shizuokensis 7 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus shizuokensis
Alkalihalobacillus lehensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Alkalihalobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alkalihalobacillus;Alkalihalobacillus lehensis
Alkalihalobacillus lindianensis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Alkalihalobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alkalihalobacillus;Alkalihalobacillus lindianensis
Alkalihalobacillus pseudalcaliphilus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Alkalihalobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alkalihalobacillus;Alkalihalobacillus pseudalcaliphilus
Alteribacillus bidgolensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Alteribacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alteribacillus;Alteribacillus bidgolensis
Anoxybacillus kaynarcensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Anoxybacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Anoxybacillus;Anoxybacillus kaynarcensis
Bacillus massiliglaciei 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus;Bacillus massiliglaciei
Cytobacillus solani 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Cytobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Cytobacillus;Cytobacillus solani
Gracilibacillus salitolerans 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Gracilibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Gracilibacillus;Gracilibacillus salitolerans
Gracilibacillus xinjiangensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Gracilibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Gracilibacillus;Gracilibacillus xinjiangensis
Halalkalibacillus sediminis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Halalkalibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Halalkalibacillus;Halalkalibacillus sediminis
Halolactibacillus halophilus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Halolactibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Halolactibacillus;Halolactibacillus halophilus
Lentibacillus persicus 7 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Lentibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Lentibacillus;Lentibacillus persicus
Litchfieldia salsa 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Litchfieldia Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Litchfieldia;Litchfieldia salsa
Mangrovibacillus cuniculi 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Mangrovibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Mangrovibacillus;Mangrovibacillus cuniculi
Margalitia camelliae 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Margalitia Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Margalitia;Margalitia camelliae
Mesobacillus persicus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Mesobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Mesobacillus;Mesobacillus persicus
Metabacillus flavus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Metabacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Metabacillus;Metabacillus flavus
Oceanobacillus gochujangensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Oceanobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Oceanobacillus;Oceanobacillus gochujangensis
Oceanobacillus limi 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Oceanobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Oceanobacillus;Oceanobacillus limi
Oceanobacillus longus 13 13 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Oceanobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Oceanobacillus;Oceanobacillus longus
Ornithinibacillus halophilus 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Ornithinibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Ornithinibacillus;Ornithinibacillus halophilus
Parageobacillus thermantarcticus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Parageobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Parageobacillus;Parageobacillus thermantarcticus
Psychrobacillus vulpis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Psychrobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Psychrobacillus;Psychrobacillus vulpis
Pueribacillus theae 11 11 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Pueribacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Pueribacillus;Pueribacillus theae
Rossellomorea aquimaris 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Rossellomorea Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Rossellomorea;Rossellomorea aquimaris
Rossellomorea marisflavi 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Rossellomorea Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Rossellomorea;Rossellomorea marisflavi
Saliterribacillus persicus 10 10 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Saliterribacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Saliterribacillus;Saliterribacillus persicus
Virgibacillus marismortui 12 12 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Virgibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Virgibacillus;Virgibacillus marismortui
Exiguobacterium aurantiacum 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillales_Incertae_sedis Exiguobacterium Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillales_Incertae_sedis;Exiguobacterium;Exiguobacterium aurantiacum
Listeria booriae 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria booriae
Listeria costaricensis 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria costaricensis
Listeria goaensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria goaensis
Listeria ivanovii 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria ivanovii
Listeria rocourtiae 5 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria rocourtiae
Listeria rustica 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria rustica
Listeria seeligeri 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria seeligeri
Listeria valentina 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria valentina
Listeria welshimeri 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria welshimeri
Brevibacillus aydinogluensis 9 9 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Brevibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus;Brevibacillus aydinogluensis
Cohnella fontinalis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Cohnella Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Cohnella;Cohnella fontinalis
Fontibacillus pullulanilyticus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Fontibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Fontibacillus;Fontibacillus pullulanilyticus
Paenibacillus aceris 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus aceris
Paenibacillus antibioticophila 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus antibioticophila
Paenibacillus antri 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus antri
Paenibacillus bovis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus bovis
Paenibacillus larvae 7 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus larvae
Paenibacillus lutrae 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus lutrae
Paenibacillus macerans 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus macerans
Paenibacillus nematophilus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus nematophilus
Paenibacillus sabinae 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus sabinae
Paenibacillus turicensis 51 51 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus turicensis
Paenibacillus typhae 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus typhae
Jeotgalibacillus alimentarius 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Jeotgalibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Jeotgalibacillus;Jeotgalibacillus alimentarius
Jeotgalibacillus malaysiensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Jeotgalibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Jeotgalibacillus;Jeotgalibacillus malaysiensis
Jeotgalibacillus salarius 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Jeotgalibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Jeotgalibacillus;Jeotgalibacillus salarius
Savagea faecisuis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Savagea Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Savagea;Savagea faecisuis
Ureibacillus thermosphaericus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Ureibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Ureibacillus;Ureibacillus thermosphaericus
Abyssicoccus albus 7 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Staphylococcaceae Abyssicoccus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Abyssicoccus;Abyssicoccus albus
Aliicoccus persicus 5 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Staphylococcaceae Aliicoccus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Aliicoccus;Aliicoccus persicus
Geothermomicrobium terrae 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Geothermomicrobium Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Geothermomicrobium;Geothermomicrobium terrae
Planifilum yunnanense 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Planifilum Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Planifilum;Planifilum yunnanense
Thermoactinomyces daqus 9 9 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Thermoactinomyces Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Thermoactinomyces;Thermoactinomyces daqus
Thermoflavimicrobium daqui 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Thermoflavimicrobium Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Thermoflavimicrobium;Thermoflavimicrobium daqui
Abiotrophia defectiva 38 38 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Aerococcaceae Abiotrophia Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae;Abiotrophia;Abiotrophia defectiva
Suicoccus acidiformans 42 42 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Aerococcaceae Suicoccus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae;Suicoccus;Suicoccus acidiformans
Carnobacterium gallinarum 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Carnobacterium Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Carnobacterium;Carnobacterium gallinarum
Granulicatella adiacens 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Granulicatella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella;Granulicatella adiacens
Trichococcus palustris 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Trichococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Trichococcus;Trichococcus palustris
Trichococcus pasteurii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Trichococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Trichococcus;Trichococcus pasteurii
Enterococcus asini 9 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus asini
Enterococcus dispar 35 35 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus dispar
Enterococcus durans 10 10 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus durans
Enterococcus faecalis 24 24 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus faecalis
Enterococcus faecium 16 16 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus faecium
Enterococcus florum 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus florum
Enterococcus gallinarum 9 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus gallinarum
Enterococcus hirae 13 13 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus hirae
Enterococcus mediterraneensis 12 12 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus mediterraneensis
Enterococcus mundtii 17 17 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus mundtii
Enterococcus pseudoavium 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus pseudoavium
Enterococcus saccharolyticus 14 14 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus saccharolyticus
Enterococcus sulfureus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus sulfureus
Enterococcus wangshanyuanii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus wangshanyuanii
Vagococcus xieshaowenii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Vagococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Vagococcus;Vagococcus xieshaowenii
Apilactobacillus bombintestini 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Apilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Apilactobacillus;Apilactobacillus bombintestini
Apilactobacillus ozensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Apilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Apilactobacillus;Apilactobacillus ozensis
Companilactobacillus alimentarius 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus alimentarius
Companilactobacillus crustorum 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus crustorum
Companilactobacillus insicii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus insicii
Companilactobacillus kimchii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus kimchii
Companilactobacillus metriopterae 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus metriopterae
Companilactobacillus nuruki 7 7 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus nuruki
Companilactobacillus versmoldensis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus versmoldensis
Dellaglioa algida 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Dellaglioa Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Dellaglioa;Dellaglioa algida
Fructilactobacillus fructivorans 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Fructilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Fructilactobacillus;Fructilactobacillus fructivorans
Furfurilactobacillus curtus 36 36 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Furfurilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Furfurilactobacillus;Furfurilactobacillus curtus
Furfurilactobacillus siliginis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Furfurilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Furfurilactobacillus;Furfurilactobacillus siliginis
Lacticaseibacillus brantae 23 23 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus brantae
Lacticaseibacillus casei 529 529 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus casei
Lacticaseibacillus chiayiensis 378 378 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus chiayiensis
Lacticaseibacillus manihotivorans 11 11 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus manihotivorans
Lacticaseibacillus pantheris 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus pantheris
Lacticaseibacillus paracasei 2268 2268 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus paracasei
Lacticaseibacillus porcinae 13 13 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus porcinae
Lacticaseibacillus rhamnosus 2019 2019 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus rhamnosus
Lacticaseibacillus saniviri 60 60 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus saniviri
Lacticaseibacillus songhuajiangensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus songhuajiangensis
Lacticaseibacillus zeae 442 442 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus zeae
Lactiplantibacillus argentoratensis 1621 1621 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus argentoratensis
Lactiplantibacillus daoliensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus daoliensis
Lactiplantibacillus daowaiensis 12 12 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus daowaiensis
Lactiplantibacillus dongliensis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus dongliensis
Lactiplantibacillus fabifermentans 191 191 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus fabifermentans
Lactiplantibacillus garii 6 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus garii
Lactiplantibacillus herbarum 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus herbarum
Lactiplantibacillus modestisalitolerans 9 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus modestisalitolerans
Lactiplantibacillus mudanjiangensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus mudanjiangensis
Lactiplantibacillus nangangensis 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus nangangensis
Lactiplantibacillus paraplantarum 253 253 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus paraplantarum
Lactiplantibacillus pentosus 4078 4078 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus pentosus
Lactiplantibacillus pingfangensis 21 21 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus pingfangensis
Lactiplantibacillus plajomi 1771 1771 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus plajomi
Lactiplantibacillus plantarum 9727 9727 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus plantarum
Lactiplantibacillus xiangfangensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus xiangfangensis
Lactobacillus acidophilus 1174 1174 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus acidophilus
Lactobacillus amylovorus 52 52 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus amylovorus
Lactobacillus crispatus 97 97 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus crispatus
Lactobacillus delbrueckii 60 60 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus delbrueckii
Lactobacillus gallinarum 44 44 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus gallinarum
Lactobacillus gasseri 10 10 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus gasseri
Lactobacillus hamsteri 8 8 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus hamsteri
Lactobacillus helveticus 40 40 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus helveticus
Lactobacillus hominis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus hominis
Lactobacillus jensenii 11 11 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus jensenii
Lactobacillus kefiranofaciens 10 10 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus kefiranofaciens
Lactobacillus kitasatonis 17 17 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus kitasatonis
Lactobacillus mulieris 9 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus mulieris
Lactobacillus paragasseri 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus paragasseri
Lactobacillus selangorensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus selangorensis
Lactobacillus terrae 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus terrae
Lapidilactobacillus bayanensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lapidilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lapidilactobacillus;Lapidilactobacillus bayanensis
Lapidilactobacillus concavus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lapidilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lapidilactobacillus;Lapidilactobacillus concavus
Latilactobacillus curvatus 9 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Latilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus;Latilactobacillus curvatus
Latilactobacillus graminis 23 23 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Latilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus;Latilactobacillus graminis
Latilactobacillus sakei 322 322 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Latilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus;Latilactobacillus sakei
Lentilactobacillus buchneri 899 899 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus buchneri
Lentilactobacillus curieae 41 41 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus curieae
Lentilactobacillus hilgardii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus hilgardii
Lentilactobacillus kefiri 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus kefiri
Lentilactobacillus kisonensis 80 80 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus kisonensis
Lentilactobacillus otakiensis 73 73 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus otakiensis
Lentilactobacillus parabuchneri 232 232 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus parabuchneri
Lentilactobacillus parafarraginis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus parafarraginis
Lentilactobacillus parakefiri 21 21 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus parakefiri
Lentilactobacillus rapi 18 18 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus rapi
Lentilactobacillus senioris 17 17 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus senioris
Lentilactobacillus sunkii 129 129 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus sunkii
Levilactobacillus bambusae 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Levilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus;Levilactobacillus bambusae
Levilactobacillus namurensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Levilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus;Levilactobacillus namurensis
Levilactobacillus suantsaii 11 11 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Levilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus;Levilactobacillus suantsaii
Levilactobacillus zymae 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Levilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus;Levilactobacillus zymae
Ligilactobacillus agilis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus agilis
Ligilactobacillus faecis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus faecis
Ligilactobacillus murinus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus murinus
Ligilactobacillus salivarius 6 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus salivarius
Limosilactobacillus agrestis 7 7 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus agrestis
Limosilactobacillus balticus 12 12 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus balticus
Limosilactobacillus coleohominis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus coleohominis
Limosilactobacillus equigenerosi 14 14 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus equigenerosi
Limosilactobacillus fermentum 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus fermentum
Limosilactobacillus gastricus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus gastricus
Limosilactobacillus mucosae 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus mucosae
Limosilactobacillus reuteri 26 26 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus reuteri
Limosilactobacillus rudii 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus rudii
Liquorilactobacillus aquaticus 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Liquorilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus;Liquorilactobacillus aquaticus
Liquorilactobacillus capillatus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Liquorilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus;Liquorilactobacillus capillatus
Liquorilactobacillus oeni 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Liquorilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus;Liquorilactobacillus oeni
Liquorilactobacillus satsumensis 13 13 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Liquorilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus;Liquorilactobacillus satsumensis
Loigolactobacillus bifermentans 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Loigolactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Loigolactobacillus;Loigolactobacillus bifermentans
Loigolactobacillus coryniformis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Loigolactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Loigolactobacillus;Loigolactobacillus coryniformis
Paucilactobacillus suebicus 50 50 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Paucilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Paucilactobacillus;Paucilactobacillus suebicus
Paucilactobacillus vaccinostercus 6 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Paucilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Paucilactobacillus;Paucilactobacillus vaccinostercus
Paucilactobacillus wasatchensis 23 23 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Paucilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Paucilactobacillus;Paucilactobacillus wasatchensis
Pediococcus acidilactici 10 10 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Pediococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus acidilactici
Pediococcus claussenii 9 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Pediococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus claussenii
Pediococcus pentosaceus 13 13 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Pediococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus pentosaceus
Pediococcus stilesii 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Pediococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus stilesii
Periweissella beninensis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Periweissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Periweissella;Periweissella beninensis
Periweissella fabalis 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Periweissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Periweissella;Periweissella fabalis
Periweissella ghanensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Periweissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Periweissella;Periweissella ghanensis
Secundilactobacillus malefermentans 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Secundilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus;Secundilactobacillus malefermentans
Secundilactobacillus paracollinoides 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Secundilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus;Secundilactobacillus paracollinoides
Secundilactobacillus similis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Secundilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus;Secundilactobacillus similis
Weissella bombi 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella bombi
Weissella cibaria 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella cibaria
Weissella kandleri 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella kandleri
Weissella muntiaci 6 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella muntiaci
Weissella soli 19 19 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella soli
Lactococcus allomyrinae 64 64 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus allomyrinae
Lactococcus cremoris 224 224 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus cremoris
Lactococcus fujiensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus fujiensis
Lactococcus garvieae 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus garvieae
Lactococcus lactis 637 637 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus lactis
Lactococcus protaetiae 88 88 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus protaetiae
Lactococcus taiwanensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus taiwanensis
Streptococcus cristatus 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus cristatus
Streptococcus entericus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus entericus
Streptococcus equinus 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus equinus
Streptococcus gordonii 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus gordonii
Streptococcus lutetiensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus lutetiensis
Streptococcus mitis 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus mitis
Streptococcus oralis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus oralis
Streptococcus parasuis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus parasuis
Streptococcus penaeicida 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus penaeicida
Streptococcus salivarius 38 38 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus salivarius
Streptococcus thermophilus 458 458 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus thermophilus
Streptococcus vestibularis 12 12 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus vestibularis
Streptococcus vicugnae 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus vicugnae
Caloramator indicus 2 2 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Clostridiaceae Caloramator Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Clostridiaceae;Caloramator;Caloramator indicus
Syntrophococcus sucromutans 2 2 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Lachnospiraceae Syntrophococcus Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae;Syntrophococcus;Syntrophococcus sucromutans
Acutalibacter muris 6 6 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Oscillospiraceae Acutalibacter Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Oscillospiraceae;Acutalibacter;Acutalibacter muris
Lactimicrobium massiliense 5 5 Bacteria Bacteria_none Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Lactimicrobium Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Lactimicrobium;Lactimicrobium massiliense
Stecheria intestinalis 3 3 Bacteria Bacteria_none Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Stecheria Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Stecheria;Stecheria intestinalis
Afipia broomeae 2 2 Bacteria Bacteria_none Proteobacteria Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Bacteria;Bacteria_none;Proteobacteria;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Afipia;Afipia broomeae
Cupriavidus laharis 2 2 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus laharis
Cupriavidus metallidurans 2 2 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus metallidurans
Aquabacterium citratiphilum 2 2 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Burkholderiales_Incertae_sedis Aquabacterium Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Aquabacterium;Aquabacterium citratiphilum
Alteromonas mediterranea 8 8 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Alteromonas Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Alteromonas;Alteromonas mediterranea
Salinimonas sediminis 5 5 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Salinimonas Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Salinimonas;Salinimonas sediminis
Corallincola holothuriorum 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Psychromonadaceae Corallincola Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Psychromonadaceae;Corallincola;Corallincola holothuriorum
Citrobacter rodentium 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Citrobacter Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Citrobacter;Citrobacter rodentium
Cronobacter turicensis 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Cronobacter Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Cronobacter;Cronobacter turicensis
Enterobacter quasihormaechei 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Enterobacter;Enterobacter quasihormaechei
Salmonella enterica 4 4 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Salmonella;Salmonella enterica
Siccibacter colletis 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Siccibacter Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Siccibacter;Siccibacter colletis
Mixta intestinalis 12 12 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Erwiniaceae Mixta Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Mixta;Mixta intestinalis
Unknown 16961 16961 Unclassified Unknown Unknown Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown

Rarefied abundance table for the phylum rank.

All samples have been randomly subsetted to have the same number of reads.

phylum barcode08 total superkingdom kingdom tax
Actinobacteria 22 25 Bacteria Bacteria_none Bacteria;Bacteria_none;Actinobacteria
Firmicutes 28201 28215 Bacteria Bacteria_none Bacteria;Bacteria_none;Firmicutes
Proteobacteria 84 82 Bacteria Bacteria_none Bacteria;Bacteria_none;Proteobacteria
Unknown 16112 16097 Unclassified Unknown Unclassified;Unknown;Unknown

Rarefied abundance table for the class rank.

All samples have been randomly subsetted to have the same number of reads.

class barcode08 total superkingdom kingdom phylum tax
Actinomycetia 23 24 Bacteria Bacteria_none Actinobacteria Bacteria;Bacteria_none;Actinobacteria;Actinomycetia
Bacilli 28197 28173 Bacteria Bacteria_none Firmicutes Bacteria;Bacteria_none;Firmicutes;Bacilli
Clostridia 18 17 Bacteria Bacteria_none Firmicutes Bacteria;Bacteria_none;Firmicutes;Clostridia
Desulfuribacillia 2 2 Bacteria Bacteria_none Firmicutes Bacteria;Bacteria_none;Firmicutes;Desulfuribacillia
Erysipelotrichia 9 7 Bacteria Bacteria_none Firmicutes Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia
Alphaproteobacteria 4 4 Bacteria Bacteria_none Proteobacteria Bacteria;Bacteria_none;Proteobacteria;Alphaproteobacteria
Betaproteobacteria 11 11 Bacteria Bacteria_none Proteobacteria Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria
Deltaproteobacteria 2 2 Bacteria Bacteria_none Proteobacteria Bacteria;Bacteria_none;Proteobacteria;Deltaproteobacteria
Gammaproteobacteria 64 64 Bacteria Bacteria_none Proteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria
Unknown 16086 16112 Unclassified Unknown Unknown Unclassified;Unknown;Unknown;Unknown

Rarefied abundance table for the order rank.

All samples have been randomly subsetted to have the same number of reads.

order barcode08 total superkingdom kingdom phylum class tax
Bifidobacteriales 13 14 Bacteria Bacteria_none Actinobacteria Actinomycetia Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Bifidobacteriales
Micrococcales 7 8 Bacteria Bacteria_none Actinobacteria Actinomycetia Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Micrococcales
Bacillales 456 454 Bacteria Bacteria_none Firmicutes Bacilli Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales
Lactobacillales 27719 27684 Bacteria Bacteria_none Firmicutes Bacilli Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales
Eubacteriales 17 17 Bacteria Bacteria_none Firmicutes Clostridia Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales
Desulfuribacillales 2 2 Bacteria Bacteria_none Firmicutes Desulfuribacillia Bacteria;Bacteria_none;Firmicutes;Desulfuribacillia;Desulfuribacillales
Erysipelotrichales 10 10 Bacteria Bacteria_none Firmicutes Erysipelotrichia Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales
Hyphomicrobiales 3 2 Bacteria Bacteria_none Proteobacteria Alphaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Alphaproteobacteria;Hyphomicrobiales
Burkholderiales 10 11 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales
Alteromonadales 23 21 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales
Enterobacterales 35 35 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales
Oceanospirillales 3 4 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Oceanospirillales
Pseudomonadales 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Pseudomonadales
Vibrionales 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Vibrionales
Unknown 16108 16144 Unclassified Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown

Rarefied abundance table for the family rank.

All samples have been randomly subsetted to have the same number of reads.

family barcode08 total superkingdom kingdom phylum class order tax
Bifidobacteriaceae 14 14 Bacteria Bacteria_none Actinobacteria Actinomycetia Bifidobacteriales Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Bifidobacteriales;Bifidobacteriaceae
Microbacteriaceae 5 6 Bacteria Bacteria_none Actinobacteria Actinomycetia Micrococcales Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Micrococcales;Microbacteriaceae
Micrococcaceae 2 2 Bacteria Bacteria_none Actinobacteria Actinomycetia Micrococcales Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Micrococcales;Micrococcaceae
Alicyclobacillaceae 36 37 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae
Bacillaceae 188 188 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae
Bacillales_Incertae_sedis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillales_Incertae_sedis
Listeriaceae 38 38 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae
Paenibacillaceae 125 132 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae
Planococcaceae 18 17 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae
Staphylococcaceae 13 15 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae
Thermoactinomycetaceae 18 18 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae
Aerococcaceae 77 76 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae
Carnobacteriaceae 16 15 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae
Enterococcaceae 171 173 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae
Lactobacillaceae 25982 25945 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae
Streptococcaceae 1484 1501 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae
Clostridiaceae 4 4 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Clostridiaceae
Lachnospiraceae 3 3 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae
Oscillospiraceae 7 7 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Oscillospiraceae
Desulfuribacillaceae 1 2 Bacteria Bacteria_none Firmicutes Desulfuribacillia Desulfuribacillales Bacteria;Bacteria_none;Firmicutes;Desulfuribacillia;Desulfuribacillales;Desulfuribacillaceae
Erysipelotrichaceae 8 8 Bacteria Bacteria_none Firmicutes Erysipelotrichia Erysipelotrichales Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae
Nitrobacteraceae 3 2 Bacteria Bacteria_none Proteobacteria Alphaproteobacteria Hyphomicrobiales Bacteria;Bacteria_none;Proteobacteria;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae
Burkholderiaceae 6 6 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae
Burkholderiales_Incertae_sedis 4 4 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis
Alteromonadaceae 16 16 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae
Psychromonadaceae 3 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Psychromonadaceae
Enterobacteriaceae 20 22 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae
Erwiniaceae 12 13 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Erwiniaceae
Halomonadaceae 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Oceanospirillales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae
Pseudomonadaceae 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Pseudomonadales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae
Vibrionaceae 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Vibrionales Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae
Unknown 16113 16121 Unclassified Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown

Rarefied abundance table for the genus rank.

All samples have been randomly subsetted to have the same number of reads.

genus barcode08 total superkingdom kingdom phylum class order family tax
Bifidobacterium 13 14 Bacteria Bacteria_none Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium
Microbacterium 5 6 Bacteria Bacteria_none Actinobacteria Actinomycetia Micrococcales Microbacteriaceae Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Micrococcales;Microbacteriaceae;Microbacterium
Alicyclobacillus 37 38 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus
Alkalihalobacillus 14 13 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alkalihalobacillus
Alteribacillus 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alteribacillus
Anaerobacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Anaerobacillus
Anoxybacillus 6 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Anoxybacillus
Bacillus 17 16 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus
Cytobacillus 5 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Cytobacillus
Gracilibacillus 9 9 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Gracilibacillus
Halalkalibacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Halalkalibacillus
Halobacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Halobacillus
Halolactibacillus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Halolactibacillus
Lentibacillus 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Lentibacillus
Litchfieldia 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Litchfieldia
Lysinibacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Lysinibacillus
Mangrovibacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Mangrovibacillus
Margalitia 8 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Margalitia
Mesobacillus 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Mesobacillus
Metabacillus 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Metabacillus
Oceanobacillus 24 25 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Oceanobacillus
Ornithinibacillus 7 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Ornithinibacillus
Parageobacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Parageobacillus
Psychrobacillus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Psychrobacillus
Pueribacillus 10 11 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Pueribacillus
Robertmurraya 3 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Robertmurraya
Rossellomorea 8 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Rossellomorea
Salicibibacter 1 1 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Salicibibacter
Saliterribacillus 10 10 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Saliterribacillus
Virgibacillus 16 16 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Virgibacillus
Exiguobacterium 5 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillales_Incertae_sedis Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillales_Incertae_sedis;Exiguobacterium
Brochothrix 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Brochothrix
Listeria 36 37 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria
Brevibacillus 13 14 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus
Cohnella 4 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Cohnella
Fontibacillus 3 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Fontibacillus
Paenibacillus 108 111 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus
Jeotgalibacillus 8 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Jeotgalibacillus
Planococcus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Planococcus
Savagea 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Savagea
Ureibacillus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Ureibacillus
Abyssicoccus 7 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Staphylococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Abyssicoccus
Aliicoccus 5 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Staphylococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Aliicoccus
Staphylococcus 2 1 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Staphylococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus
Geothermomicrobium 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Geothermomicrobium
Planifilum 2 1 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Planifilum
Thermoactinomyces 10 10 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Thermoactinomyces
Thermoflavimicrobium 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Thermoflavimicrobium
Abiotrophia 33 38 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Aerococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae;Abiotrophia
Suicoccus 42 41 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Aerococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae;Suicoccus
Carnobacterium 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Carnobacterium
Granulicatella 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella
Trichococcus 7 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Trichococcus
Enterococcus 168 172 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus
Vagococcus 3 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Vagococcus
Apilactobacillus 7 7 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Apilactobacillus
Companilactobacillus 31 35 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus
Dellaglioa 4 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Dellaglioa
Fructilactobacillus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Fructilactobacillus
Furfurilactobacillus 38 37 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Furfurilactobacillus
Lacticaseibacillus 5467 5466 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus
Lactiplantibacillus 16835 16812 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus
Lactobacillus 1474 1479 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus
Lapidilactobacillus 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lapidilactobacillus
Latilactobacillus 332 338 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus
Lentilactobacillus 1439 1437 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus
Leuconostoc 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc
Levilactobacillus 25 24 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus
Ligilactobacillus 16 14 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus
Limosilactobacillus 72 74 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus
Liquorilactobacillus 21 20 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus
Loigolactobacillus 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Loigolactobacillus
Paucilactobacillus 73 77 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Paucilactobacillus
Pediococcus 38 37 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus
Periweissella 12 12 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Periweissella
Secundilactobacillus 9 10 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus
Weissella 34 34 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella
Lactococcus 987 962 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus
Streptococcus 521 529 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus
Caloramator 2 2 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Clostridiaceae Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Clostridiaceae;Caloramator
Syntrophococcus 2 2 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Lachnospiraceae Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae;Syntrophococcus
Acutalibacter 6 6 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Oscillospiraceae Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Oscillospiraceae;Acutalibacter
Desulfuribacillus 2 2 Bacteria Bacteria_none Firmicutes Desulfuribacillia Desulfuribacillales Desulfuribacillaceae Bacteria;Bacteria_none;Firmicutes;Desulfuribacillia;Desulfuribacillales;Desulfuribacillaceae;Desulfuribacillus
Lactimicrobium 4 4 Bacteria Bacteria_none Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Lactimicrobium
Stecheria 3 3 Bacteria Bacteria_none Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Stecheria
Afipia 2 2 Bacteria Bacteria_none Proteobacteria Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bacteria;Bacteria_none;Proteobacteria;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Afipia
Cupriavidus 6 6 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus
Aquabacterium 3 3 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Burkholderiales_Incertae_sedis Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Aquabacterium
Alteromonas 9 9 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Alteromonas
Paraglaciecola 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Paraglaciecola
Salinimonas 5 5 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Salinimonas
Corallincola 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Psychromonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Psychromonadaceae;Corallincola
Citrobacter 4 4 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Citrobacter
Cronobacter 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Cronobacter
Enterobacter 4 4 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Enterobacter
Escherichia 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia
Salmonella 5 5 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Salmonella
Siccibacter 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Siccibacter
Mixta 10 12 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Erwiniaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Mixta
Halomonas 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Oceanospirillales Halomonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Halomonas
Pseudomonas 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas
Unknown 16108 16125 Unclassified Unknown Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown

Rarefied abundance table for the species rank.

All samples have been randomly subsetted to have the same number of reads.

species barcode08 total superkingdom kingdom phylum class order family genus tax
Bifidobacterium animalis 9 9 Bacteria Bacteria_none Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium animalis
Bifidobacterium longum 3 3 Bacteria Bacteria_none Actinobacteria Actinomycetia Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium longum
Microbacterium pseudoresistens 5 4 Bacteria Bacteria_none Actinobacteria Actinomycetia Micrococcales Microbacteriaceae Microbacterium Bacteria;Bacteria_none;Actinobacteria;Actinomycetia;Micrococcales;Microbacteriaceae;Microbacterium;Microbacterium pseudoresistens
Alicyclobacillus contaminans 7 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus contaminans
Alicyclobacillus kakegawensis 4 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus kakegawensis
Alicyclobacillus macrosporangiidus 8 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus macrosporangiidus
Alicyclobacillus sacchari 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus sacchari
Alicyclobacillus sendaiensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus sendaiensis
Alicyclobacillus shizuokensis 6 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Alicyclobacillaceae Alicyclobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Alicyclobacillaceae;Alicyclobacillus;Alicyclobacillus shizuokensis
Alkalihalobacillus lehensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Alkalihalobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alkalihalobacillus;Alkalihalobacillus lehensis
Alkalihalobacillus lindianensis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Alkalihalobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alkalihalobacillus;Alkalihalobacillus lindianensis
Alkalihalobacillus pseudalcaliphilus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Alkalihalobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alkalihalobacillus;Alkalihalobacillus pseudalcaliphilus
Alteribacillus bidgolensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Alteribacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Alteribacillus;Alteribacillus bidgolensis
Anoxybacillus kaynarcensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Anoxybacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Anoxybacillus;Anoxybacillus kaynarcensis
Bacillus massiliglaciei 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Bacillus;Bacillus massiliglaciei
Cytobacillus solani 2 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Cytobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Cytobacillus;Cytobacillus solani
Gracilibacillus salitolerans 6 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Gracilibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Gracilibacillus;Gracilibacillus salitolerans
Gracilibacillus xinjiangensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Gracilibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Gracilibacillus;Gracilibacillus xinjiangensis
Halalkalibacillus sediminis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Halalkalibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Halalkalibacillus;Halalkalibacillus sediminis
Halolactibacillus halophilus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Halolactibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Halolactibacillus;Halolactibacillus halophilus
Lentibacillus persicus 6 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Lentibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Lentibacillus;Lentibacillus persicus
Litchfieldia salsa 4 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Litchfieldia Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Litchfieldia;Litchfieldia salsa
Mangrovibacillus cuniculi 2 1 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Mangrovibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Mangrovibacillus;Mangrovibacillus cuniculi
Margalitia camelliae 7 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Margalitia Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Margalitia;Margalitia camelliae
Mesobacillus persicus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Mesobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Mesobacillus;Mesobacillus persicus
Metabacillus flavus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Metabacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Metabacillus;Metabacillus flavus
Oceanobacillus gochujangensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Oceanobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Oceanobacillus;Oceanobacillus gochujangensis
Oceanobacillus limi 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Oceanobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Oceanobacillus;Oceanobacillus limi
Oceanobacillus longus 11 13 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Oceanobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Oceanobacillus;Oceanobacillus longus
Ornithinibacillus halophilus 6 6 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Ornithinibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Ornithinibacillus;Ornithinibacillus halophilus
Parageobacillus thermantarcticus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Parageobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Parageobacillus;Parageobacillus thermantarcticus
Psychrobacillus vulpis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Psychrobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Psychrobacillus;Psychrobacillus vulpis
Pueribacillus theae 9 10 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Pueribacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Pueribacillus;Pueribacillus theae
Rossellomorea aquimaris 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Rossellomorea Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Rossellomorea;Rossellomorea aquimaris
Rossellomorea marisflavi 4 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Rossellomorea Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Rossellomorea;Rossellomorea marisflavi
Saliterribacillus persicus 10 10 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Saliterribacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Saliterribacillus;Saliterribacillus persicus
Virgibacillus marismortui 11 12 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillaceae Virgibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillaceae;Virgibacillus;Virgibacillus marismortui
Exiguobacterium aurantiacum 4 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Bacillales_Incertae_sedis Exiguobacterium Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Bacillales_Incertae_sedis;Exiguobacterium;Exiguobacterium aurantiacum
Listeria booriae 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria booriae
Listeria costaricensis 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria costaricensis
Listeria goaensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria goaensis
Listeria ivanovii 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria ivanovii
Listeria rocourtiae 4 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria rocourtiae
Listeria rustica 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria rustica
Listeria seeligeri 3 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria seeligeri
Listeria valentina 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria valentina
Listeria welshimeri 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Listeriaceae Listeria Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Listeriaceae;Listeria;Listeria welshimeri
Brevibacillus aydinogluensis 7 9 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Brevibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Brevibacillus;Brevibacillus aydinogluensis
Cohnella fontinalis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Cohnella Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Cohnella;Cohnella fontinalis
Fontibacillus pullulanilyticus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Fontibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Fontibacillus;Fontibacillus pullulanilyticus
Paenibacillus aceris 7 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus aceris
Paenibacillus antibioticophila 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus antibioticophila
Paenibacillus antri 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus antri
Paenibacillus bovis 2 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus bovis
Paenibacillus larvae 6 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus larvae
Paenibacillus lutrae 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus lutrae
Paenibacillus macerans 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus macerans
Paenibacillus nematophilus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus nematophilus
Paenibacillus sabinae 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus sabinae
Paenibacillus turicensis 48 47 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus turicensis
Paenibacillus typhae 8 8 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Paenibacillaceae Paenibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Paenibacillaceae;Paenibacillus;Paenibacillus typhae
Jeotgalibacillus alimentarius 4 4 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Jeotgalibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Jeotgalibacillus;Jeotgalibacillus alimentarius
Jeotgalibacillus malaysiensis 2 1 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Jeotgalibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Jeotgalibacillus;Jeotgalibacillus malaysiensis
Jeotgalibacillus salarius 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Jeotgalibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Jeotgalibacillus;Jeotgalibacillus salarius
Savagea faecisuis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Savagea Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Savagea;Savagea faecisuis
Ureibacillus thermosphaericus 3 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Planococcaceae Ureibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Planococcaceae;Ureibacillus;Ureibacillus thermosphaericus
Abyssicoccus albus 7 7 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Staphylococcaceae Abyssicoccus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Abyssicoccus;Abyssicoccus albus
Aliicoccus persicus 5 5 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Staphylococcaceae Aliicoccus Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Aliicoccus;Aliicoccus persicus
Geothermomicrobium terrae 2 3 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Geothermomicrobium Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Geothermomicrobium;Geothermomicrobium terrae
Planifilum yunnanense 1 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Planifilum Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Planifilum;Planifilum yunnanense
Thermoactinomyces daqus 9 9 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Thermoactinomyces Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Thermoactinomyces;Thermoactinomyces daqus
Thermoflavimicrobium daqui 1 2 Bacteria Bacteria_none Firmicutes Bacilli Bacillales Thermoactinomycetaceae Thermoflavimicrobium Bacteria;Bacteria_none;Firmicutes;Bacilli;Bacillales;Thermoactinomycetaceae;Thermoflavimicrobium;Thermoflavimicrobium daqui
Abiotrophia defectiva 33 35 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Aerococcaceae Abiotrophia Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae;Abiotrophia;Abiotrophia defectiva
Suicoccus acidiformans 39 41 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Aerococcaceae Suicoccus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Aerococcaceae;Suicoccus;Suicoccus acidiformans
Carnobacterium gallinarum 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Carnobacterium Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Carnobacterium;Carnobacterium gallinarum
Granulicatella adiacens 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Granulicatella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella;Granulicatella adiacens
Trichococcus palustris 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Trichococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Trichococcus;Trichococcus palustris
Trichococcus pasteurii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Carnobacteriaceae Trichococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Trichococcus;Trichococcus pasteurii
Enterococcus asini 9 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus asini
Enterococcus dispar 32 32 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus dispar
Enterococcus durans 10 10 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus durans
Enterococcus faecalis 22 24 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus faecalis
Enterococcus faecium 15 14 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus faecium
Enterococcus florum 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus florum
Enterococcus gallinarum 9 8 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus gallinarum
Enterococcus hirae 13 13 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus hirae
Enterococcus mediterraneensis 12 12 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus mediterraneensis
Enterococcus mundtii 17 16 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus mundtii
Enterococcus pseudoavium 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus pseudoavium
Enterococcus saccharolyticus 14 14 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus saccharolyticus
Enterococcus sulfureus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus sulfureus
Enterococcus wangshanyuanii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus wangshanyuanii
Vagococcus xieshaowenii 2 1 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Enterococcaceae Vagococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Vagococcus;Vagococcus xieshaowenii
Apilactobacillus bombintestini 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Apilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Apilactobacillus;Apilactobacillus bombintestini
Apilactobacillus ozensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Apilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Apilactobacillus;Apilactobacillus ozensis
Companilactobacillus alimentarius 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus alimentarius
Companilactobacillus crustorum 4 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus crustorum
Companilactobacillus insicii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus insicii
Companilactobacillus kimchii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus kimchii
Companilactobacillus metriopterae 4 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus metriopterae
Companilactobacillus nuruki 7 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus nuruki
Companilactobacillus versmoldensis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Companilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Companilactobacillus;Companilactobacillus versmoldensis
Dellaglioa algida 4 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Dellaglioa Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Dellaglioa;Dellaglioa algida
Fructilactobacillus fructivorans 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Fructilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Fructilactobacillus;Fructilactobacillus fructivorans
Furfurilactobacillus curtus 34 35 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Furfurilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Furfurilactobacillus;Furfurilactobacillus curtus
Furfurilactobacillus siliginis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Furfurilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Furfurilactobacillus;Furfurilactobacillus siliginis
Lacticaseibacillus brantae 19 23 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus brantae
Lacticaseibacillus casei 505 498 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus casei
Lacticaseibacillus chiayiensis 360 355 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus chiayiensis
Lacticaseibacillus manihotivorans 11 10 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus manihotivorans
Lacticaseibacillus pantheris 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus pantheris
Lacticaseibacillus paracasei 2156 2163 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus paracasei
Lacticaseibacillus porcinae 11 13 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus porcinae
Lacticaseibacillus rhamnosus 1918 1926 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus rhamnosus
Lacticaseibacillus saniviri 57 55 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus saniviri
Lacticaseibacillus songhuajiangensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus songhuajiangensis
Lacticaseibacillus zeae 410 421 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus zeae
Lactiplantibacillus argentoratensis 1532 1538 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus argentoratensis
Lactiplantibacillus daoliensis 6 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus daoliensis
Lactiplantibacillus daowaiensis 12 12 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus daowaiensis
Lactiplantibacillus dongliensis 4 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus dongliensis
Lactiplantibacillus fabifermentans 185 183 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus fabifermentans
Lactiplantibacillus garii 6 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus garii
Lactiplantibacillus herbarum 2 1 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus herbarum
Lactiplantibacillus modestisalitolerans 8 8 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus modestisalitolerans
Lactiplantibacillus mudanjiangensis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus mudanjiangensis
Lactiplantibacillus nangangensis 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus nangangensis
Lactiplantibacillus paraplantarum 240 237 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus paraplantarum
Lactiplantibacillus pentosus 3879 3897 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus pentosus
Lactiplantibacillus pingfangensis 19 19 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus pingfangensis
Lactiplantibacillus plajomi 1691 1681 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus plajomi
Lactiplantibacillus plantarum 9267 9260 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus plantarum
Lactiplantibacillus xiangfangensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactiplantibacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactiplantibacillus;Lactiplantibacillus xiangfangensis
Lactobacillus acidophilus 1112 1108 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus acidophilus
Lactobacillus amylovorus 51 50 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus amylovorus
Lactobacillus crispatus 93 94 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus crispatus
Lactobacillus delbrueckii 56 59 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus delbrueckii
Lactobacillus gallinarum 41 44 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus gallinarum
Lactobacillus gasseri 10 10 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus gasseri
Lactobacillus hamsteri 6 7 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus hamsteri
Lactobacillus helveticus 38 38 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus helveticus
Lactobacillus hominis 2 1 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus hominis
Lactobacillus jensenii 9 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus jensenii
Lactobacillus kefiranofaciens 8 10 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus kefiranofaciens
Lactobacillus kitasatonis 17 17 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus kitasatonis
Lactobacillus mulieris 9 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus mulieris
Lactobacillus paragasseri 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus paragasseri
Lactobacillus selangorensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus selangorensis
Lactobacillus terrae 2 1 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus terrae
Lapidilactobacillus bayanensis 1 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lapidilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lapidilactobacillus;Lapidilactobacillus bayanensis
Lapidilactobacillus concavus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lapidilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lapidilactobacillus;Lapidilactobacillus concavus
Latilactobacillus curvatus 8 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Latilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus;Latilactobacillus curvatus
Latilactobacillus graminis 22 19 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Latilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus;Latilactobacillus graminis
Latilactobacillus sakei 302 302 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Latilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Latilactobacillus;Latilactobacillus sakei
Lentilactobacillus buchneri 845 857 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus buchneri
Lentilactobacillus curieae 40 39 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus curieae
Lentilactobacillus hilgardii 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus hilgardii
Lentilactobacillus kefiri 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus kefiri
Lentilactobacillus kisonensis 77 77 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus kisonensis
Lentilactobacillus otakiensis 70 69 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus otakiensis
Lentilactobacillus parabuchneri 225 220 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus parabuchneri
Lentilactobacillus parafarraginis 3 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus parafarraginis
Lentilactobacillus parakefiri 19 21 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus parakefiri
Lentilactobacillus rapi 18 16 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus rapi
Lentilactobacillus senioris 16 16 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus senioris
Lentilactobacillus sunkii 122 124 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Lentilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lentilactobacillus;Lentilactobacillus sunkii
Levilactobacillus bambusae 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Levilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus;Levilactobacillus bambusae
Levilactobacillus namurensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Levilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus;Levilactobacillus namurensis
Levilactobacillus suantsaii 10 11 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Levilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus;Levilactobacillus suantsaii
Levilactobacillus zymae 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Levilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Levilactobacillus;Levilactobacillus zymae
Ligilactobacillus agilis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus agilis
Ligilactobacillus faecis 2 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus faecis
Ligilactobacillus murinus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus murinus
Ligilactobacillus salivarius 6 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Ligilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus salivarius
Limosilactobacillus agrestis 7 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus agrestis
Limosilactobacillus balticus 11 12 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus balticus
Limosilactobacillus coleohominis 1 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus coleohominis
Limosilactobacillus equigenerosi 13 14 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus equigenerosi
Limosilactobacillus fermentum 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus fermentum
Limosilactobacillus gastricus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus gastricus
Limosilactobacillus mucosae 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus mucosae
Limosilactobacillus reuteri 25 25 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus reuteri
Limosilactobacillus rudii 5 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Limosilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus rudii
Liquorilactobacillus aquaticus 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Liquorilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus;Liquorilactobacillus aquaticus
Liquorilactobacillus capillatus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Liquorilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus;Liquorilactobacillus capillatus
Liquorilactobacillus oeni 1 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Liquorilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus;Liquorilactobacillus oeni
Liquorilactobacillus satsumensis 13 11 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Liquorilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Liquorilactobacillus;Liquorilactobacillus satsumensis
Loigolactobacillus bifermentans 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Loigolactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Loigolactobacillus;Loigolactobacillus bifermentans
Loigolactobacillus coryniformis 1 1 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Loigolactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Loigolactobacillus;Loigolactobacillus coryniformis
Paucilactobacillus suebicus 50 47 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Paucilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Paucilactobacillus;Paucilactobacillus suebicus
Paucilactobacillus vaccinostercus 6 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Paucilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Paucilactobacillus;Paucilactobacillus vaccinostercus
Paucilactobacillus wasatchensis 22 22 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Paucilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Paucilactobacillus;Paucilactobacillus wasatchensis
Pediococcus acidilactici 10 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Pediococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus acidilactici
Pediococcus claussenii 9 9 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Pediococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus claussenii
Pediococcus pentosaceus 13 13 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Pediococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus pentosaceus
Pediococcus stilesii 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Pediococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Pediococcus;Pediococcus stilesii
Periweissella beninensis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Periweissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Periweissella;Periweissella beninensis
Periweissella fabalis 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Periweissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Periweissella;Periweissella fabalis
Periweissella ghanensis 1 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Periweissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Periweissella;Periweissella ghanensis
Secundilactobacillus malefermentans 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Secundilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus;Secundilactobacillus malefermentans
Secundilactobacillus paracollinoides 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Secundilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus;Secundilactobacillus paracollinoides
Secundilactobacillus similis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Secundilactobacillus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Secundilactobacillus;Secundilactobacillus similis
Weissella bombi 5 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella bombi
Weissella cibaria 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella cibaria
Weissella kandleri 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella kandleri
Weissella muntiaci 5 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella muntiaci
Weissella soli 19 18 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Lactobacillaceae Weissella Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Weissella;Weissella soli
Lactococcus allomyrinae 61 61 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus allomyrinae
Lactococcus cremoris 211 212 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus cremoris
Lactococcus fujiensis 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus fujiensis
Lactococcus garvieae 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus garvieae
Lactococcus lactis 602 606 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus lactis
Lactococcus protaetiae 84 80 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus protaetiae
Lactococcus taiwanensis 6 6 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Lactococcus;Lactococcus taiwanensis
Streptococcus cristatus 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus cristatus
Streptococcus entericus 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus entericus
Streptococcus equinus 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus equinus
Streptococcus gordonii 3 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus gordonii
Streptococcus lutetiensis 2 3 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus lutetiensis
Streptococcus mitis 5 5 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus mitis
Streptococcus oralis 4 4 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus oralis
Streptococcus parasuis 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus parasuis
Streptococcus penaeicida 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus penaeicida
Streptococcus salivarius 36 38 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus salivarius
Streptococcus thermophilus 427 428 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus thermophilus
Streptococcus vestibularis 11 12 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus vestibularis
Streptococcus vicugnae 2 2 Bacteria Bacteria_none Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus vicugnae
Caloramator indicus 2 2 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Clostridiaceae Caloramator Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Clostridiaceae;Caloramator;Caloramator indicus
Syntrophococcus sucromutans 2 1 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Lachnospiraceae Syntrophococcus Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae;Syntrophococcus;Syntrophococcus sucromutans
Acutalibacter muris 6 6 Bacteria Bacteria_none Firmicutes Clostridia Eubacteriales Oscillospiraceae Acutalibacter Bacteria;Bacteria_none;Firmicutes;Clostridia;Eubacteriales;Oscillospiraceae;Acutalibacter;Acutalibacter muris
Lactimicrobium massiliense 5 4 Bacteria Bacteria_none Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Lactimicrobium Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Lactimicrobium;Lactimicrobium massiliense
Stecheria intestinalis 2 3 Bacteria Bacteria_none Firmicutes Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Stecheria Bacteria;Bacteria_none;Firmicutes;Erysipelotrichia;Erysipelotrichales;Erysipelotrichaceae;Stecheria;Stecheria intestinalis
Afipia broomeae 2 2 Bacteria Bacteria_none Proteobacteria Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Bacteria;Bacteria_none;Proteobacteria;Alphaproteobacteria;Hyphomicrobiales;Nitrobacteraceae;Afipia;Afipia broomeae
Cupriavidus laharis 2 2 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus laharis
Cupriavidus metallidurans 1 1 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Cupriavidus;Cupriavidus metallidurans
Aquabacterium citratiphilum 2 2 Bacteria Bacteria_none Proteobacteria Betaproteobacteria Burkholderiales Burkholderiales_Incertae_sedis Aquabacterium Bacteria;Bacteria_none;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiales_Incertae_sedis;Aquabacterium;Aquabacterium citratiphilum
Alteromonas mediterranea 8 8 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Alteromonas Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Alteromonas;Alteromonas mediterranea
Salinimonas sediminis 5 5 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Alteromonadaceae Salinimonas Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Salinimonas;Salinimonas sediminis
Corallincola holothuriorum 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Alteromonadales Psychromonadaceae Corallincola Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Alteromonadales;Psychromonadaceae;Corallincola;Corallincola holothuriorum
Citrobacter rodentium 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Citrobacter Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Citrobacter;Citrobacter rodentium
Cronobacter turicensis 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Cronobacter Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Cronobacter;Cronobacter turicensis
Enterobacter quasihormaechei 3 3 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Enterobacter;Enterobacter quasihormaechei
Salmonella enterica 4 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Salmonella;Salmonella enterica
Siccibacter colletis 2 2 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Enterobacteriaceae Siccibacter Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Siccibacter;Siccibacter colletis
Mixta intestinalis 11 12 Bacteria Bacteria_none Proteobacteria Gammaproteobacteria Enterobacterales Erwiniaceae Mixta Bacteria;Bacteria_none;Proteobacteria;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Mixta;Mixta intestinalis
Unknown 16108 16079 Unclassified Unknown Unknown Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown

Alpha Diversity

Sample diversity indices. Indices are calculated from the original abundance table.

Indices barcode08 total
Berger Parker index 0.36 0.36
Effective number of species 11.18 11.18
Fisher's alpha 79.29 79.29
Inverse Simpson's index 1.24 1.24
Pielou's evenness 0.39 0.39
Richness 506.0 506.0
Shannon diversity index 2.41 2.41
Simpson's index 0.81 0.81
Total counts 46759.0 46759.0
Note that the taxon 'Unknown' is considered as a unique taxon.

Sample-based rarefaction curves to display observed taxa richness. Sample size shows the number of reads sampled from the total amount of reads analyzed during the real time analysis. The Y-axis indicates the number of unique taxa at the last analyzed taxonomic rank in those subsampled reads.

Note that Unknown taxon is considered as a unique taxon.
This plot includes all the counts (except Unknown), previous to apply any filter threshold based on abundances.

Software versions

Name Version
pysam 0.21.0
pandas 2.0.3
fastcat 0.15.1
minimap2 2.26-r1175
samtools 1.18
taxonkit v0.15.1
Kraken 2.1.3

Workflow parameters

Key Value
help False
version False
fastq None
bam /home/artem/katya_demux/barcode08.bam
sample None
sample_sheet None
classifier minimap2
exclude_host None
max_len 1800
min_len 1200
min_read_qual 10
threads 16
server_threads 2
kraken_clients 2
taxonomy None
reference None
ref2taxid None
database None
taxonomic_rank S
minimap2filter None
minimap2exclude False
keep_bam False
split_prefix False
minimap2_by_reference False
store_dir store_dir
out_dir /home/artem/katya_demux_out
bracken_length None
port 8080
host localhost
external_kraken2 False
kraken2_memory_mapping False
include_kraken2_assignments False
kraken2_confidence 0
batch_size 0
real_time False
read_limit None
database_set ncbi_16s_18s
database_sets {'ncbi_16s_18s': {'reference': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s/ncbi_targeted_loci_16s_18s.fna', 'database': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s/ncbi_targeted_loci_kraken2.tar.gz', 'ref2taxid': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s/ref2taxid.targloci.tsv', 'taxonomy': 'https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump_archive/taxdmp_2023-01-01.zip'}, 'ncbi_16s_18s_28s_ITS': {'reference': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s_28s_ITS/ncbi_16s_18s_28s_ITS.fna', 'database': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s_28s_ITS/ncbi_16s_18s_28s_ITS_kraken2.tar.gz', 'ref2taxid': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s_28s_ITS/ref2taxid.ncbi_16s_18s_28s_ITS.tsv', 'taxonomy': 'https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump_archive/taxdmp_2023-01-01.zip'}, 'SILVA_138_1': {'database': None}}
amr False
amr_db resfinder
amr_minid 80
amr_mincov 80
abundance_threshold 1
n_taxa_barplot 9
aws_image_prefix None
aws_queue None
disable_ping False
monochrome_logs False
validate_params True
show_hidden_params False
analyse_unclassified False
schema_ignore_params show_hidden_params,validate_params,monochrome_logs,aws_queue,aws_image_prefix,wf,amr,amr_db,amr_minid,amr_mincov,database_sets
wf {'stats': True, 'keep_unaligned': True, 'example_cmd': ['--fastq wf-16s-demo/test_data', '--minimap2_by_reference'], 'agent': None, 'container_sha': 'sha44a6dacff5f2001d917b774647bb4cbc1b53bc76', 'common_sha': 'shaa17469f05b9753f7e63525d2826202b73f475e6c'}